Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01140 ATGTCTTTCAATTCGATTCTATGTTGTCATCAAACACTGATTCTCCTCAGTGTTTTGTTACTTTTCACTTCTTCACATAATAATTATATCTGTTCTGCAAACGATCAACTAAATAATAGCACTGATGGTTTCTTCACTATTTCCAGTTTCACCTACCCTCAAACTACTCTTAAACCCTTTGATTTTCATTATATTAGAGTTGATATACCGCCGTGGTTTTCCGCAGTCTCCATAGCATTGAACTCAGATGTAGACCTTGACGTTGCGAAAATCGAAAAGGTTCCCAAAAGGTCACTGCCAATAATATGCTTTAGAGATGGAAGTCCTCCTCTACCAGATGCTTTAAACACATCTCTGAAATATTCAGCTATATCAGGAATAAATGGTCTTGATACGGAGCAGTGCTTTCCTATGGAGAAAAATATCACTATGAAATTGACTAATGAGCTGATATCTCCAGGTGCTTGGTACATTGGTCTTTTCAACGGCATCGGAGATGAAAGAACACAATCAAGGATGATTATTCGAGGCACGTCATACTCCTTTAGTGCCAATATAAGTGTGGAAGCTTGCACAAATTCGATGATGAGGGGGGAGTTCTGTAACAGTACTGTCAATCCACTTTCATGTACAGCATCTGATGTCAATAATTCTACGAAGGCGACTACACTGAAGAAACCAACTATTGAAAATGCGGTGACCTGCAAAACTAACTTCGAAACTTTGTGTGTTCAGGAAGGCATACCTAACTTATATTCCTTGGATATAAATAATGTGGTCGAAGAATTGACCATTACGGCTGGAAATATCAGATTCAATATTACACCTTCTAGTAACGCTTCTGGTGCAAGTGATGTTAATTTATTGTGTTTTGCTCGACACGGTGCAATACCTGCAAATAGTTTGTATGATTATTCCAGTGATTTAAATAAATCCCCTCTTGTTATTCGTTCTCCACTGGTCGGTCGTTGGTACATTAGTGTATTACCGGTTAATCTTACCAAAAAGTTTGGAGAGACTCATGACGGTGATGGAAAAGTTTGCTATTCCCTTGATTCACAAATGCTTCAGTGTCCACTTGGAAAAGCTGGACCAAATTGTACAACGAGTAGCTACGCACTTCAGACAGTTCTAAGGACAAGTCCAAACCCGTTTGAATCATATTATTTGCCAATTGGTGAAGGAGCATCTTCTTCTGCCAATTTTCCTCTCGAACCACTTTTAAAAAACTCATCAAACTTCGGAGAAGCCAATAACATTTGGACTTATTTTACTTTCGACATTCCTCGTGGTGCAGCTGGCCGAAACATTCACGTACGGCTATCCTCAGATACAAAGATTAGTTACGAAGTTTATGCGAGATTCGGTGGATTACCTTCTGTTGATATCTGGGACTATTATTATGCTAACAAGACAAGGAAAAGTGACCAATCGATGTTTTTCATGCTATATGATTCGAATGACAAAAATGTTGATTTTTACATTATTTATGCTAGAGAAGGAACTTGGAGTTTTGGTCTAAGACATGTCAATACTAGCAGTGATTCTTTGAAACAGAAAACTATCATGTCTATTTCACTTGAAGGATGCCCTAAACAATGCTCCTCTCATGGAAGCTGTAAAAATTCTTTTGATGCTACCGGGTTGACGTCATACAGCTTCTGTTCTTGTGATCGAAACCATGGTGGCTTTGACTGTAGCGTCGAAATTGTGTCACATAAAGCGCACACACTTCAATCAGTTTTTCTGATAGGATCAAATGCTGCAGCCTTACTTCCTGCCTTTTGGGCGCTTCGACAGAAGGCGTATGCGGAATGGGTTATATTCACAGCCAGTGGAATTTCAAGTGGAGTATATCATGCATGCGACGTAGGCACCTGGTGTGCATTGAACTTCAGTGTCCTACAGTTTATGGACTTCTGGCTCTCTTTCATGGCCGTGATTAGCACTTTTGTATACCTAGCTACCATCGACGAAGTATATAAGAGGGCAATCCACACAACTGTTTTTATCTTTACTGCTCTCATGTCGATAACTAATGCAACCAGGTCTTCAAATATTGTTCTTGTGATTGTGATTGGGGCTCTTGGTCTTCTTATTGGATGGTTGATAGAAATGTCAACAAAGTATAGGTCCCTTTCATTTTCATTTGGATTCTCGCCAAATTTCCTTCATAGCTTGTTAACTATAAAGCTATGGTTATATAATCTTGTGAAGACACTTTTGAGACGGTTCCGGTGGGGTTTTATATTAGCCGGATTTGCCGCATTATTCATGGCAGGAGTAAGCTGGACGCTTGAAACAAGTGACAGCTACTGGATATGGCATAGCTTTTGGCATGCTACAATATACACATCTTCTTTCTTCTTCCTTTGTTCAAAAGCAAATATTGTTGAAGCTGAGAATCAGTTACCTTGA 2418 0.3929 MSFNSILCCHQTLILLSVLLLFTSSHNNYICSANDQLNNSTDGFFTISSFTYPQTTLKPFDFHYIRVDIPPWFSAVSIALNSDVDLDVAKIEKVPKRSLPIICFRDGSPPLPDALNTSLKYSAISGINGLDTEQCFPMEKNITMKLTNELISPGAWYIGLFNGIGDERTQSRMIIRGTSYSFSANISVEACTNSMMRGEFCNSTVNPLSCTASDVNNSTKATTLKKPTIENAVTCKTNFETLCVQEGIPNLYSLDINNVVEELTITAGNIRFNITPSSNASGASDVNLLCFARHGAIPANSLYDYSSDLNKSPLVIRSPLVGRWYISVLPVNLTKKFGETHDGDGKVCYSLDSQMLQCPLGKAGPNCTTSSYALQTVLRTSPNPFESYYLPIGEGASSSANFPLEPLLKNSSNFGEANNIWTYFTFDIPRGAAGRNIHVRLSSDTKISYEVYARFGGLPSVDIWDYYYANKTRKSDQSMFFMLYDSNDKNVDFYIIYAREGTWSFGLRHVNTSSDSLKQKTIMSISLEGCPKQCSSHGSCKNSFDATGLTSYSFCSCDRNHGGFDCSVEIVSHKAHTLQSVFLIGSNAAALLPAFWALRQKAYAEWVIFTASGISSGVYHACDVGTWCALNFSVLQFMDFWLSFMAVISTFVYLATIDEVYKRAIHTTVFIFTALMSITNATRSSNIVLVIVIGALGLLIGWLIEMSTKYRSLSFSFGFSPNFLHSLLTIKLWLYNLVKTLLRRFRWGFILAGFAALFMAGVSWTLETSDSYWIWHSFWHATIYTSSFFFLCSKANIVEAENQLP 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01140 805 ProSitePatterns EGF-like domain signature 1. 555 566 IPR000742 -
Trre15g01140 805 Pfam Protein of unknown function (DUF3522) 576 780 IPR021910 GO:0016020
Trre15g01140 805 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 9 797 IPR021910 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01140 Trre-Chr15 8840760 8847094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01140 - - gmx:100777848 1247.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02512 13 22924021 22931951 Trre15g01140 15 8840760 8847094 PCT