Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02512 ATGACTTTTTTCAATTTGATTCTGAATTTTGTGATTCTTTTTTCTTCTTCCTTTACCCTACTCTCTGCAAATGGCGAACCCACCATTAAAGGTCAAACCTTTATTGTTTCAAGCTTCAGCTACCCTCACACTAGGCTCAGACCCTTTGATCTGCGCTATATCAGAGTTGACTTGCCTCCATGGTTCTCTGCAATGTCTATAGCACTGAACTCGGATGTAGACCTTGAGGTCTCTAGAATTGAAAGGGTTCCAATGAGCACACTGCCAATAATATGCTTTAGAGATGGAGGTCCTCCCTTGCCTGATGCCTTAAATATAACTTTGAAAGATTCAGCCATTTCAGGAATAAATGGTTTAGATGTGGAGCAGTGCTTTCCTATGCAGAAAAACATCACTATGAAACTGACAAACAATCAGATATCTCCAGGTGTTTGGTTCATTGGTCTTTTCAATGGCATTGGACCTACAAGGACACAGTCGAAGATGATTATCCGAGGTCCAGCGTACTCCTTCGCTGCCAATATAACTGTGGAAGCATGCACAAATTCAATGATGATGGGAGATTTCTGTAATAGTCCTGTTTATCCATTTTCATGCACAACTTCTGATGTCAATAATGCTTTAAAGGCTACGACGGTAATCAAGCCAATGTTGGAAAATTTGATGACCTGCAAAAGTAATTTTAAAACTTCCTGTGCTCATGAAGGTGTACCAAATGTCTTCTCCTTGGATATAATAAATGTGGCAGAAGCATTTACCGTTTCAGCAAGTGATATCAAATTCAATATTACTCCTTCAAACAATACATCTGGTGCAACTGATGTTAGTTTAATGTGTTTTGTTCGCCATGGTTCAATGCCTTCAATGACTTCGTATGATTACTCCAGTGATTTAAATAAAGTGCCGCTGGTTATTCATTCACCATTAATTGGTCGTTGGTACATTACTATCGTACCAATCAATCTTATAAAGATCCAGGATAGTAATGTAACGGTCTGCTATTCAGTCAAATCTCATGTGCTTCAATGCCCACTTGGGAAGACAGGACCAAATTGTACAATGGATATCTACATGCTTCAGACATATGTACGGAGAGGTCCAACTCCCTTTGAATCATACTATTTACCGGTCGGTACTGGAACATCTTATGCTTCTGCCAATTTCCCTCTTGAACCACTTTTGAGTAACTCGTCATACAATGGAGAACCTGGTAACATTTGGACTTACTTACTTTTAGACATTCCTCGTGGTGCAGCCGGAGGAAATATTCACGTACAACTATCCTCGGATGTGAAGATCAATTATGAAGTTTATGCTAGGTTTGGTGGGTTACCATCACTTATTAGCTGGGACTATTATTATGCTAACAAGACAATGAGAAGCGATACATCTATGTTTTTCATGCTATACGATTCGAGTGACAACAAGATCAATTTCTATATTATGTATGCTAGAGAAGGAACTTGGGGTTTGGGTCTTAGACATCTCAATACCAGCATCATTCCTGCTAAAGGGCCAACTGTCATGTCTCTTTCGCTTGAACGGTGCCCTAAACATTGTTCCTCCCATGGGGACTGTAAATTTTCTTTTGATGCTAGTGGCTTGACATCATACAGCTTTTGCTCTTGTGATCGAAACCATGGAGGCATTGACTGTAGCGTTGAAATTGTAACACATCAAGGGCATTTACGACAATCATTTTTTCTCATTGTATCTAATGCTGCGGCCATACTTCCTGCCTATTGGGCTCTTCGGCAGAAGGCATTAGCAGAATGGGTTTTGTTCACATCCAGTGGAATTGCTAGTGGACTATATCATGCTTGTGACGTAGGTGCCTGGTGTGCATTGAGCTATAATGTCTTGCAGTTCATGGATTTCTGGCTCTCTTTCATGGCTGTGATTAGCACTTTTCTTTATCTAGCTACCATCGATGAAGTATTGAAGAGGGCAATTCACACAGCTGTAGCTATCCTTACTGCCCTAATGGCCGTAACAAATGCAACTCGGTCTTCCAATGTTGTTCTTGTGATGGTGATTGGTGCTCTTGGTCTCCTTATTGGATGGGTTATAGAGATGTCAACAAAGTATAGGTCCCTCTCATTTTCAGTTAGATTCTCATTTGATTTCTCTCATAGTTTGCACGTGATAAAGCGATGGCTATGTAATCTTGTTGGGTCACTTTTAAGACGGTACCACTGGCCTTTTGCCTTAGCTGGTTTTTCTGCACTGTCAATGGCAATAGCGAGCTGGACACTCGAAACCAGTGAAAGTTACTGGTTTTGGCATAGCTTTTGGCATATTACAATATACACATCTTCTTTCTGCTTCCTTTGTTCAAAAGCAAATATTGTGGACATTGAGAATCAACTACCTGCAAATGGAAACTATGAACTGACCCATCAGGATTCACTTCCAAGAAATGGTTAA 2427 0.4034 MTFFNLILNFVILFSSSFTLLSANGEPTIKGQTFIVSSFSYPHTRLRPFDLRYIRVDLPPWFSAMSIALNSDVDLEVSRIERVPMSTLPIICFRDGGPPLPDALNITLKDSAISGINGLDVEQCFPMQKNITMKLTNNQISPGVWFIGLFNGIGPTRTQSKMIIRGPAYSFAANITVEACTNSMMMGDFCNSPVYPFSCTTSDVNNALKATTVIKPMLENLMTCKSNFKTSCAHEGVPNVFSLDIINVAEAFTVSASDIKFNITPSNNTSGATDVSLMCFVRHGSMPSMTSYDYSSDLNKVPLVIHSPLIGRWYITIVPINLIKIQDSNVTVCYSVKSHVLQCPLGKTGPNCTMDIYMLQTYVRRGPTPFESYYLPVGTGTSYASANFPLEPLLSNSSYNGEPGNIWTYLLLDIPRGAAGGNIHVQLSSDVKINYEVYARFGGLPSLISWDYYYANKTMRSDTSMFFMLYDSSDNKINFYIMYAREGTWGLGLRHLNTSIIPAKGPTVMSLSLERCPKHCSSHGDCKFSFDASGLTSYSFCSCDRNHGGIDCSVEIVTHQGHLRQSFFLIVSNAAAILPAYWALRQKALAEWVLFTSSGIASGLYHACDVGAWCALSYNVLQFMDFWLSFMAVISTFLYLATIDEVLKRAIHTAVAILTALMAVTNATRSSNVVLVMVIGALGLLIGWVIEMSTKYRSLSFSVRFSFDFSHSLHVIKRWLCNLVGSLLRRYHWPFALAGFSALSMAIASWTLETSESYWFWHSFWHITIYTSSFCFLCSKANIVDIENQLPANGNYELTHQDSLPRNG 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02512 808 ProSitePatterns EGF-like domain signature 1. 541 552 IPR000742 -
Trre13g02512 808 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 22 806 IPR021910 GO:0016020
Trre13g02512 808 Pfam Protein of unknown function (DUF3522) 562 767 IPR021910 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02512 Trre-Chr13 22924021 22931951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02512 - - gmx:100778959 1333.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02512 13 22924021 22931951 Trre13g02512 13 22924021 22931951 ECH
Trre13g02512 13 22924021 22931951 Trre15g01140 15 8840760 8847094 PCT