Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01112 ATGAAGAAGTTTGTGCTCAAGTTAGAGTTACATGATGACAAGGATAAGAAGAAAGCACTCAAAACAGTTTCAACTCTTTCAGGGATTGATGCCATCTCAATGGACATGAAAGAAAAGAAATTGACAGTGATAGGAACAGTAGATCCGGTAAATGTGGTGAGCAAATTGAGAAAATTTTGGCACACAGAAATAATAGCTGTTGGACCAGCAAAAGAGCCTGAGAAGAAGAAAGAAGAACCTAAGAAAGAAGGAGAGAAGAAAGAAGAAGGAAAGAAAGAAGACGGAAAGAAAGACGATGGAAAGAAAGAAGAAGAGAAGAAAAAAGAAGCACCCCCACCACCAGATCCTATTCAAGAATGGGTTAGGAATTATAGGGCATATAATCCCTACATGACAACACATTACCATGTTCAAAGCATGGAAGAGAATCCTAATGCATGTGTCATTTGTTAA 453 0.3797 MKKFVLKLELHDDKDKKKALKTVSTLSGIDAISMDMKEKKLTVIGTVDPVNVVSKLRKFWHTEIIAVGPAKEPEKKKEEPKKEGEKKEEGKKEDGKKDDGKKEEEKKKEAPPPPDPIQEWVRNYRAYNPYMTTHYHVQSMEENPNACVIC 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01112 150 MobiDBLite consensus disorder prediction 68 113 - -
Trre15g01112 150 Pfam Heavy-metal-associated domain 10 58 IPR006121 GO:0046872
Trre15g01112 150 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Trre15g01112 150 Coils Coil 150 150 - -
Trre15g01112 150 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 147 - -
Trre15g01112 150 Gene3D - 1 72 - -
Trre15g01112 150 SUPERFAMILY HMA, heavy metal-associated domain 2 59 IPR036163 GO:0046872
Trre15g01112 150 MobiDBLite consensus disorder prediction 67 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01112 Trre-Chr15 8610976 8612887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01112 - - tpra:123887084 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02464 13 22154579 22157201 Trre15g01112 15 8610976 8612887 PCT