Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02464 ATGAAGAAATTTGTACTCAAATTAGATTTGGAAGATGATAAGGCAAAGCAGAAGGCCTTGAAGACAGTTTCAACACTTTCAGGGATTGATGCAATCACCATGGACATGAAGGAGAAAAAATTAACCGTGGTAGGAACGGTAGATCCAGTAAAAATTGTGAGCAAACTTCGAAAATATTGGCAAGCAGATTTAATCTCAGTAGGACCGGCAAAGGAGCCGGAGAAGAAAGAAGAGCCAAAGAAAGAAGAACCAAAGAAAGAAGAAGAGAAGAAAGAAGAGGGAAAGAAAGAAGAACCAAAGAAGGAAGAAGAGAAAAAGGAAGAACCAAAGAAAGAAGAAGAAAAAAAGGAAGAGAAGAAAGAAGAAGAGAAAAAAGAAGAGGAAAAAAAGAAAGAGCCAGCTCCTGACCCTGTTTTAGAAATGGTGAAGGCTTATAGGGCATATAATCCCCACATGACTACTTATTATTATGTTCAAAGTATGGAAGAAAATCCAAATGCTTGTGTGATTTGTTAA 516 0.3702 MKKFVLKLDLEDDKAKQKALKTVSTLSGIDAITMDMKEKKLTVVGTVDPVKIVSKLRKYWQADLISVGPAKEPEKKEEPKKEEPKKEEEKKEEGKKEEPKKEEEKKEEPKKEEEKKEEKKEEEKKEEEKKKEPAPDPVLEMVKAYRAYNPHMTTYYYVQSMEENPNACVIC 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02464 171 Coils Coil 101 132 - -
Trre13g02464 171 Gene3D - 1 72 - -
Trre13g02464 171 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 168 - -
Trre13g02464 171 MobiDBLite consensus disorder prediction 69 137 - -
Trre13g02464 171 MobiDBLite consensus disorder prediction 64 139 - -
Trre13g02464 171 Pfam Heavy-metal-associated domain 9 58 IPR006121 GO:0046872
Trre13g02464 171 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02464 Trre-Chr13 22154579 22157201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02464 - - gmx:100305540 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02464 13 22154579 22157201 Trre13g02464 13 22154579 22157201 ECH
Trre13g02464 13 22154579 22157201 Trre15g01112 15 8610976 8612887 PCT