Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01083 ATGATTGAAACGTGGAAGAAAGATGTTTTGGTAAGGAAAAAAAGAGGAACTTGTAGTACTCCATCATCTCAACAAAGTAGCATTCTTTCAACTTCAACCATTTCTGCTAGAAAGCTTTGTGCAAATCTTTGGAAAATTCACCATACACCATTTGTTAAAATGAACAAATGTGGTGATACCACTCTCCGCCGCCGTCGCCGCCAATTAACTCAGCCTCCACCAGATACCTCTCCTGACCAGGTTGCGCCATACAAAGGTACAGCAAATCCCACAAGCTCCTTAGACTTCAAAGGTAAGATTGAAGAATCAAGACACGACATTACAACATCGACGGAGTTACTTAACGTACTTAACCGATTATGGAGTCTCGAAGAACAGCATGCATCAAATATATCAGCAATGAAAGCCTTAAAAACGGAACTAGTACGAGAGAAGCAAAGGAACATGCAGGAAATGGAGAAGTTAATGAAGAAAATGATGATGGAAAAGTTTTTTAGGAAGGATAAAGAACATGATAGAATTAAAGGTGTTGTACAATCACTCAAGGAAGAGCTAGAACATGAGAGAAGGTTGCGAAATCACTACGAAAGCTTGCATCGGAAGCTTGATAAGGAGCTTTCTGAAGTAAAGTCTTCGTTCGTTGGTTGTTTGAGAAACCTTGAAAGAGAAAGAAAAACGCGAATCCTTTTGGAGAATTTGTGCAACGAGTTTGCGAAAGGAATTATGGATTACGAACAACAAGTACATTGTCTTAGGAAGAATTCAAGGAATGGTTATGTTAGAGGGAATAGCGTTGATCGGTTAATACTTCATATTTCAGAAGCTTGGCTTGACGAGCGCGCACAAATGAAGCTAGCTCAGTCGGATAGCGACTTCATACAGAGAACTCCAATTGTTGAAAAGTTAGGTTTTGATATAGAAACATTTCTTCTTGCAAACCGTTCCGTTGATTTTAGAAAATACGGTTACTCTTCGCCGGAGGAGCTCAAGGAAATTTACCCTATGGATTCCTTTCCACTACAAGATGCTGCAAGTGCACCTCAAGATATGGATCAGGAAGATTCCATTGATAATGACTGTTTTGAAACGAAAGAGATTACCGTTGAAGGACTCCGAAAACTCGGCTCCAGACCACAAAAAAACAATGCTACCGAGCTCCATCGGAAAAATAAAGGAAGCAAAAGTTCAAATAGGAAAGAGGTTATGTCAGAGGAAATCACCGAGGACTGTAACTTGCAAGCAAACATGGAGAGGAACATGTCATGTAATGATAATAATGAGAGTTGCTTCGTGGAGAAGAAATCAAATGAAATGGAAGAAGACGACATGAAACCGTGGAAATCAAAGTTGATTGCTTCAGATTTCGACAAAACCGAGTCTTTTACCAAATTGCCAAAGGGAGTCAAAGAAAACACATTGTTGGCAAAACTACTTGAAGCAAGACAAGAGAGACAGATAACTAGGTCGAAAGGTGAAAAAAGCGCCGCATCTTGA 1494 0.3983 MIETWKKDVLVRKKRGTCSTPSSQQSSILSTSTISARKLCANLWKIHHTPFVKMNKCGDTTLRRRRRQLTQPPPDTSPDQVAPYKGTANPTSSLDFKGKIEESRHDITTSTELLNVLNRLWSLEEQHASNISAMKALKTELVREKQRNMQEMEKLMKKMMMEKFFRKDKEHDRIKGVVQSLKEELEHERRLRNHYESLHRKLDKELSEVKSSFVGCLRNLERERKTRILLENLCNEFAKGIMDYEQQVHCLRKNSRNGYVRGNSVDRLILHISEAWLDERAQMKLAQSDSDFIQRTPIVEKLGFDIETFLLANRSVDFRKYGYSSPEELKEIYPMDSFPLQDAASAPQDMDQEDSIDNDCFETKEITVEGLRKLGSRPQKNNATELHRKNKGSKSSNRKEVMSEEITEDCNLQANMERNMSCNDNNESCFVEKKSNEMEEDDMKPWKSKLIASDFDKTESFTKLPKGVKENTLLAKLLEARQERQITRSKGEKSAAS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01083 497 MobiDBLite consensus disorder prediction 371 404 - -
Trre15g01083 497 MobiDBLite consensus disorder prediction 382 404 - -
Trre15g01083 497 Coils Coil 134 162 - -
Trre15g01083 497 Coils Coil 178 198 - -
Trre15g01083 497 PANTHER GB|AAF24581.1 7 490 IPR043424 -
Trre15g01083 497 MobiDBLite consensus disorder prediction 68 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01083 Trre-Chr15 8380961 8383008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01083 - - mtr:25500779 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01083 15 8380961 8383008 Trre15g01083 15 8380961 8383008 ECH
Trre13g05313 13 58205092 58207586 Trre15g01083 15 8380961 8383008 PCT