Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05313 ATGGAAAGAAGAGAAAAAGCTTTAGAGAAAAGAGAAGATGAAGAAGGATTGATAATGGTAGAAAAGTTGAAACTTGTGGGGAAGAGAGGAGGAAGAGGAAAGTCTTCAACCCCACCACCCACTTGGAGACTTATTGATTCTCAACACAATGTTGTTAACACTGTTCAGCAAGAATTTCTCAACTTTCCCTCCTCAAAAACACTCTCTGCAAGAAAACTTTGTGCTAAACTCTGGGAATTTCATTCTCACCAGCCGGCATCTGCTAGGGACTCGAGAAGAGATGTTCAAGCATCAGCTGTTCAGCACCGTAGATCAATTGACAGGAATGATTCTTCTCGACAGTCTGTGTCCCCTAGTAGTTGTCGTCACTTGATGGAAGTTACGCAAGAATCATCCAGAGAGTTAGTCAAGGTTCTCGACCGCATCTGGCGTCTTGAAGAACAGGATCCGTCGAATATGGCCATAGTGAAATCCCTGATATTAGAACTAGATCTTTCTCAAACACAGGTAAAAGAGTTACTACAAGAAAAGAATGAGAATAAGCAGGAAATAGAGAACTTAATGAAGCAAATAACAGAAGACAAACTTGTTAACAAGAACAAAGAACATGAAAAGATCAAAGCCGTAGTTCAATCAGTCAAGGAAGAGATTGATGTTGAAAGGAGGTTAAGAAAGCATTCGGAAAGCCTGTACCAGAAGCTGGCTAGTGAGCTTTCCGAAGTGAAGTCTTCGTTCCGTGGTACTCTGAGAGATCTCGAAAGAGAGAAAAAAGCAAGGATCCTTTTGGAGAATTTGTGTGATGATTTTGCCAAAGGAGTGAGAGATTATGAACATGAACTACGTTCTATTAGACACAAAGTTAATAACGGTCCTGTTAAAGGCGAAAGCCTTGATCGGCTAATACTTCATATTTCGGAAGCGTGGCTTGATGAGCGCACGCAAATGAAACTAGTTCAAGATGGTTGTGGTAGTGATCGCCCACATACACATTCAACTGTTGATAAATTACGTGTTGATATCGAAACAGTTCTTCGCGCAAAACGGTCTATTGACTTGAAGAGAGATAATAACTCCTCCGTTAAACAGCATAAGGAAATTCGCCCTCGACTACCTTCATTGGATTCCTTTCAACTAAAGGAGACAAAACATTCACCTCATAATTTTGCAGAGGAAGATTCTGTTAGTACCGACATTTATGAACAGAAAACGACTTCTTCTGACAAAGGACATACCAAGTGTTTTGTTGAGGGGAAATCAAGTGACATTGGAAGATACAAGACAAATCTATTAAATGCTCCTATTCCTATGGTATCAACTTTGTCTGAGGCAATACAAGGTCCACCAGAACATGATAGAGGCAGGACCAAGAGAATTACTTCAGGCCACAGCCTAGTTGGAAACAATTCTATGTCATCAGAAGGTGATAAGGTATATCCTGAGACTATATGCATGGAAGATTCTTGTGTTCATTCTGCAGTTAAAGTTAATGCTAGTCCTATTAAACAGTGGAAAACTGAATTGATTGTACCAGATTTTAACAAGTCTTGTTACAAATTACCTAAGGGAGTAAAAGACAATTCTTTTATGGCAAAACTGCTTGAAGCAAGGTTAGAGGGACATAAATCTTGTTCTAAGACTAGTAAAAGTTATTTTTGA 1656 0.3943 MERREKALEKREDEEGLIMVEKLKLVGKRGGRGKSSTPPPTWRLIDSQHNVVNTVQQEFLNFPSSKTLSARKLCAKLWEFHSHQPASARDSRRDVQASAVQHRRSIDRNDSSRQSVSPSSCRHLMEVTQESSRELVKVLDRIWRLEEQDPSNMAIVKSLILELDLSQTQVKELLQEKNENKQEIENLMKQITEDKLVNKNKEHEKIKAVVQSVKEEIDVERRLRKHSESLYQKLASELSEVKSSFRGTLRDLEREKKARILLENLCDDFAKGVRDYEHELRSIRHKVNNGPVKGESLDRLILHISEAWLDERTQMKLVQDGCGSDRPHTHSTVDKLRVDIETVLRAKRSIDLKRDNNSSVKQHKEIRPRLPSLDSFQLKETKHSPHNFAEEDSVSTDIYEQKTTSSDKGHTKCFVEGKSSDIGRYKTNLLNAPIPMVSTLSEAIQGPPEHDRGRTKRITSGHSLVGNNSMSSEGDKVYPETICMEDSCVHSAVKVNASPIKQWKTELIVPDFNKSCYKLPKGVKDNSFMAKLLEARLEGHKSCSKTSKSYF 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g05313 551 MobiDBLite consensus disorder prediction 85 122 - -
Trre13g05313 551 Coils Coil 156 194 - -
Trre13g05313 551 PANTHER GB|AAF24581.1 12 544 IPR043424 -
Trre13g05313 551 MobiDBLite consensus disorder prediction 85 110 - -
Trre13g05313 551 Coils Coil 196 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g05313 Trre-Chr13 58205092 58207586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05313 - - mtr:112416363 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g05313 13 58205092 58207586 Trre15g01083 15 8380961 8383008 PCT