Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01018 ATGAATAACGGTGTTGAACAATTCAGTCCTATTGAAACACAATACATAAGGAGACATCACAGACATGATTTAAGGGACAATCAGTGTTCCTCTACACTTGTCAAACACATCAAAGCCCCTGTTCACCTTGTTTGGTCTCTGGTTAGAAGATTTGATCAGCCACAAAAGTATAAACCATTTGTTAGCAGATGTATTATGCAAGGTGACCTTGGCATTGGAAGTGTTAGAGAAGTGAATGTTAAATCTGGTCTTCCAGCTACAACTAGTACTGAGAGATTGGAACAACTTGATGATGAAGAACACATTCTTGGTATTAGGATTGTTGGTGGTGACCATAGGCTAAGGAACTATTCTTCAATAATAACCGTCCATCCGGAGGTTATTGACGGAAGACCAGGTACAATGGTGATTGAATCATTTGTCGTGGACGTGCCTGAAGGAAACACGAGGGACGAAACTTGTTACTTTGTGGAGGCGTTGATCAGGTGCAACCTAAGTTCTTTAGCCGATGTCTCGGAGAGGATGGCTGTGCAGGGTCGAACCGATCCTATTCCTATTAATATCAACTCATAA 573 0.4154 MNNGVEQFSPIETQYIRRHHRHDLRDNQCSSTLVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIDGRPGTMVIESFVVDVPEGNTRDETCYFVEALIRCNLSSLADVSERMAVQGRTDPIPININS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01018 190 PANTHER - 27 170 - -
Trre15g01018 190 FunFam Abscisic acid receptor PYL9 2 182 - -
Trre15g01018 190 CDD PYR_PYL_RCAR_like 29 173 - -
Trre15g01018 190 Pfam Polyketide cyclase / dehydrase and lipid transport 29 173 IPR019587 -
Trre15g01018 190 Gene3D - 3 182 IPR023393 -
Trre15g01018 190 SUPERFAMILY Bet v1-like 29 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01018 Trre-Chr15 7958540 7960194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01018 K14496 - gmx:100500065 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01018 15 7958540 7960194 Trre1g00497 1 3713418 3713996 ECH
Trre15g01018 15 7958540 7960194 Trre15g01018 15 7958540 7960194 ECH