Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00633 ATGCAAATGATAACAATAAGACAAATGGATTATGAAACTAAAGAAGTTGATGCTACTACCTTAAGAACAATGAGTTTCAAGAGTGAAAGAAATATAGATGAATTATATAATCAACAAGGGTTAGATGAAGAAGCTATAGTTGAAGAATCAACATGTTCAAAGAAAAGGAAAATTGGGAATTTGAAGCTGCAAACTACATTTTCATTCAAATATTTAGTTACAGATAACTCTGATTCAAAACATGGTTTTGTTGATGATGTTTTCAATAAACAAAGTCCTTCAATTTTGTTAGATAAACCACAAATTTGGTTTTCACCAAAATCTATTGGAGAGCTTGATGTTGCAGCAATAAAGCTTCAGAAAGTTTACAAAAGTTATAGAACTAGAAGAAATTTGGCTGATTGTGCAGTTGTTTGTGAGGAGCTATGGTGGAAGGCTTTAGATTTTGCTTCTCTTAATAGGTGCTCAATATCACATTTTGATTCAGTTAAATCAGAAACAGCTCTTTCAAAATGGGCTAGAGCTAGGACTATGGCTGCTAAGGTGGGAAAAGGATTGTGCAAAGATGATAAAGCACAAAAATTAGCTCTTAGACATTGGCTTGAAGCTATTGATCCTCGTCATCGATATGGACACAACTTACACTTGTACTATAATGTCTGGTTTCATAGCCAAAGCTCACAACCTTTTTTCTACTGGTTGGATGTTGGAGATGGAAAAGAAGTAAATCTTGATAATAAGTGTCCAAGAAATGAATTACAGAAGCAGTGTATAAAGTACCTTGGACCAAAAGAAAGGGAAGTATATGAAGTGGTTATTGAAGAAGGAAGGTTTGTTTATAGAAAAAGCAAGAACCTTGTGCACACTTCTGAGGGATCTAAGTGGATTTTTGTTCTTAGCTCATCAAGAATTTTGTATGTTGGTGAAAAAAAGAAAGGTCAATTTCAACACTCAAGTTTTCTAGCTGGGGGTGCTACTATTGCATCTGGAAGATTGGTTGTCCAAAATGGTGTTCTTAATGCTATATGGCCCTATAGTGGACACTACCGTCCTACAAAGAAGAATTTCATGGAATTCATTGGCTTCTTGATGGAACACAATGTGGACTTAACAAATGTCAAGAAGTATCCAATTGATGATGATGTCCCACCTTCAGAACATGTTGACAAGGAGCTTCAATTTGAGTCCACAAATACTACTAATGCAAATTCAAGTCACTCTGCCAAAAGATGCAACCCAAATAATGTGACAACTTCACAACATAAAGAGTGCAAATCATTGTCTAGCAAATGGACCACTGGAGCTGGTCCTAGAATTGGTTGTGTGAGGGAGTACCCTACAAAACTTCAAGCTAAGGCACTTGAACAACTCAATTTATCACCAAGAGTCAACATTGGAAAAGTTGCTAATAGGACTCCCATTCCTTCACCAAGACCTAGTCCAAAAATCCACTTGTCTCCCAGACTTGTGCATATGGGTATTCCAAGTCCAAGAGTACATGTTACTCCCGCTAATTAG 1518 0.363 MQMITIRQMDYETKEVDATTLRTMSFKSERNIDELYNQQGLDEEAIVEESTCSKKRKIGNLKLQTTFSFKYLVTDNSDSKHGFVDDVFNKQSPSILLDKPQIWFSPKSIGELDVAAIKLQKVYKSYRTRRNLADCAVVCEELWWKALDFASLNRCSISHFDSVKSETALSKWARARTMAAKVGKGLCKDDKAQKLALRHWLEAIDPRHRYGHNLHLYYNVWFHSQSSQPFFYWLDVGDGKEVNLDNKCPRNELQKQCIKYLGPKEREVYEVVIEEGRFVYRKSKNLVHTSEGSKWIFVLSSSRILYVGEKKKGQFQHSSFLAGGATIASGRLVVQNGVLNAIWPYSGHYRPTKKNFMEFIGFLMEHNVDLTNVKKYPIDDDVPPSEHVDKELQFESTNTTNANSSHSAKRCNPNNVTTSQHKECKSLSSKWTTGAGPRIGCVREYPTKLQAKALEQLNLSPRVNIGKVANRTPIPSPRPSPKIHLSPRLVHMGIPSPRVHVTPAN 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00633 505 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 20 483 IPR044159 -
Trre15g00633 505 MobiDBLite consensus disorder prediction 396 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00633 Trre-Chr15 4623750 4627338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00633 - - pvu:PHAVU_010G137300g 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00633 15 4623750 4627338 Trre11g04601 11 57886137 57888229 PCT