Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00597 ATGGCTTCAGTTGGTACAGTCAAATTTTTGTTGTGCTTTGTTCTATGGCTTTGGAACTGCAACTTTCTACCTCCTTGTCAAGGTAAACAACAAGGCTATCCATTTATAAAAAAAGCAAGTTCATTTTCATCACCATCAATTTCAACAACATCACTCAACAAAGCTTATGACTACATAATTATTGGAGGTGGAACTGCAGGGTGTCCTTTAGCAGCAACATTATCTCAAAATTTCAGTGTTTTATTACTTGAAAGAGGAGGTGTTCCTTTCACTAATCCAAATGTAACATTTCTTGAAAATTTTCACATTACCTTGGCAGACACTTCATCAACTTCAGCTTCTCAATATTTTCTTTCAACTGATGGAGTTTTTAATGCAAGAGCAAGAGTTTTGGGTGGTGGTAGTGCTATCAATGCTGGTTTCTATACTAGAGCAAGTTCAAGGTTTATAAATAAGGCAGGATGGGATCCAAAGCTAGTAAATGAGTCATACCCTTGGGTTGAGAAACAAATTGTTCATCGTCCGAAGTTTTCGCCATTTCAAAGAGCATTGAGGGACAGCCTTATAGACAATGGAGTTTCTCCTTATAATGGTTTCACCTATGATCATATTTATGGAACAAAGGTTGGTGGAACCATTTTCGATAGATTTGGTCGCCGTCACACAGCTGCTGAACTTCTTGCATCTGGAAACCCTGACAAACTTACAGTTTTGGTCCATGCTACTGTCCAAAAGATCGTTTTCGATACAACAGGTAAGAGACCAAAAGCTGTAGGAGTTATTTTCAATGATGAAAATGGGAAACAACATGAAGCAATACTTGGAAATCATATGCAAAGTGAAGTGATATTGTCTAGTGGAGCAATTGGAAGTCCTCAAATGCTACTACTAAGTGGAATTGGGCCTAAAGATGAACTTCAAAATTTGAACATCTCTGTAGTCCTTAACAATCCATTTGTTGGGAAAGGAATGATTGATAATCCTATGAACACAATATTTGTTCCTTCTAATAGGCCAATTCATCAGTCACTCATACAAACTGTTGGTATCACCAAGAAAGGTGTATACATTGAGGCTAGCAGTGGGTTCAGTCAGTCCAATAGCAGCATTCATTGTCATCATGGTATCGTCTCCGCTGAGATTGGTCAACTTTCTACAATTCCTCCCAAGCAAAGATCAATAGAAGCAATTCAAGCTTACGTAAAGAGCAAGCGAGATATACCGGTCGAAGCATTCAACGGAGGTTTTGTATTAACAAAAGTTGGCAGTGCTTGGTCAGTAGGTGATCTCAAATTGAATAACACCAATGTGGATGACAATCCTACTATTACCTTCAACTACTTCAGTCATCCGTATGATCTAAAGCGCTGCGTCGAAGGGGTTCGCATGGCAATAAAAGTAGTTCAATCGGAACACTTCACAAACTATACATTGTGTAAGAAAGAAAGTGCAGAGAAACTTCTTAATGTTAGTGTGAAGGCTAATGTTAACTTCATTCCAAGACATGCCAATGACACAACATCACTAGAGCAGTTCTGTAAAGACACTGTTATCACAATTTGGCACTACCATGGTGGATGTCATGTGGGGAAGGTAGTTGATCCTGATTATAAGGTTCTTGATGTTGATAGAGTTCGAGTTGTTGATGGCTCGACGTTTACTGAATCACCAGGAACAAATCCTCAAGCCACTGTAATGATGATGGGAAGGTACATGGGAGTGAAGATTTTGAGAGATAGGTTGGGGAGATTGGCTGGTATATAA 1764 0.3895 MASVGTVKFLLCFVLWLWNCNFLPPCQGKQQGYPFIKKASSFSSPSISTTSLNKAYDYIIIGGGTAGCPLAATLSQNFSVLLLERGGVPFTNPNVTFLENFHITLADTSSTSASQYFLSTDGVFNARARVLGGGSAINAGFYTRASSRFINKAGWDPKLVNESYPWVEKQIVHRPKFSPFQRALRDSLIDNGVSPYNGFTYDHIYGTKVGGTIFDRFGRRHTAAELLASGNPDKLTVLVHATVQKIVFDTTGKRPKAVGVIFNDENGKQHEAILGNHMQSEVILSSGAIGSPQMLLLSGIGPKDELQNLNISVVLNNPFVGKGMIDNPMNTIFVPSNRPIHQSLIQTVGITKKGVYIEASSGFSQSNSSIHCHHGIVSAEIGQLSTIPPKQRSIEAIQAYVKSKRDIPVEAFNGGFVLTKVGSAWSVGDLKLNNTNVDDNPTITFNYFSHPYDLKRCVEGVRMAIKVVQSEHFTNYTLCKKESAEKLLNVSVKANVNFIPRHANDTTSLEQFCKDTVITIWHYHGGCHVGKVVDPDYKVLDVDRVRVVDGSTFTESPGTNPQATVMMMGRYMGVKILRDRLGRLAGI 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00597 587 SUPERFAMILY FAD-linked reductases, C-terminal domain 324 526 - -
Trre15g00597 587 SUPERFAMILY FAD/NAD(P)-binding domain 48 579 IPR036188 -
Trre15g00597 587 Gene3D - 56 569 IPR036188 -
Trre15g00597 587 PIRSF Alcohol_oxidase 36 585 IPR012132 GO:0050660
Trre15g00597 587 Pfam GMC oxidoreductase 56 328 IPR000172 GO:0016614|GO:0050660
Trre15g00597 587 PANTHER OSJNBA0019K04.7 PROTEIN 18 581 - -
Trre15g00597 587 Gene3D - 173 519 - -
Trre15g00597 587 ProSitePatterns GMC oxidoreductases signature 2. 287 301 IPR000172 GO:0016614|GO:0050660
Trre15g00597 587 Pfam GMC oxidoreductase 426 570 IPR007867 GO:0016614
Trre15g00597 587 ProSitePatterns GMC oxidoreductases signature 1. 128 151 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00597 Trre-Chr15 4315207 4322190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00597 22 582 Miscellaneous Gene Families AT3G56060 50.883 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00597 K15403 - gmx:100788704 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04628 11 58018321 58024570 Trre15g00597 15 4315207 4322190 PCT