Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00468 ATGAGGCCTATTATACTCAAATGTGGTTTGGCTTTGGCTCTAACTTTTGCTGGTTTTCTCTACTCTCACTTTAGAACAAGAAGGATCAAACCTTCCCCTAAAGGACACCTTTCAGGTCATGGGAGTGAAGTTAATTTACGAGGTATTAGAGCATCATCAAGTTCTTCCAACTTCCGTTCAGAAGGATATAATTTTGATACCGAAGAAACATGCATCAACAAGGTGGTATGTAGAAGTTCTCCAATCGGTGTCTCACCAAGAACTAAACAAACCGATGAAAAAGACGACGAACTCAATGATCCTCCTATAGCATATGCCAGTCTTGAGAAAGACGATTATGAGCAAGAGATCAGAAAACTGAGGAACATGGTCATGATGCTTCAAGAGAGGGAAAGAAATCTCGAGGTTCAACTTCTCGAATACTGTGGTCTAAGAGAGCAAGAAACCGTTGTAATGGAGCTTCAAAATAGATTAAAGATAAGTAATATGGAGACAAAGATGTTCAATCTAAAATTTGAGACATTACAATCTGAGAATAGGAGATTAGAGGCACAAGTTGCTGATCACGCGAAAGTGCTCGCTGATCTTGAGGCTTCAAAAACAAAAGTGAAATTTTTGAAGAAGAAAATTAAGTATGAGGCTGAACAGAATAAAGAGCATATTGTAAATCTTAAACAAAAAGTTTCAAAGTTGCAGGACCTTGAATCTAAAGCTATTGCTAATGATCAAGAAATTCAAATGAAGTTGAAAAGGGTAAAGGATCTTGAAGCTGAGGTGGAACATTGGAGGAAATCTAATTTGAGATTGGAGAAGGACAATTCAGATTTAGCTAGAAAATTGGATTCTACTCAGATCCTTGCAAATTCTGTTCTAGAAGATCCAGAAGCAGATGCTCTAAGGGAAGAAAGTGACCGTCTCAAGCGAGAGAACGAGAGATTGATGAAAGAAATTGAGCAATTACAAGCTGATAAATGCACAGATCTTGAAGAACTAGTCTATTTAAGGTGGATAAATGCTTGTTTGAGACATGAATCAAGAAATTATCAACCTCCAAATGGTAAAACAGTTGCAAGGGACTTAAGTAAAAGCTTAAGTCCAGATTCTGAGAAGAAAGCTAAACAGCTTATACTTGAATATGCAAATACTGAAGGAAGAACTAGTAGCATTTCTTCTGATTTTGATTCTGATCAATGGTCCTCCTCACAAGCTTCTTTTGTAATAGATGGTGATGAGTGTTCTCCTCTTGAAAACTCGTCCGATGCACGAGTCAAAGATAATAGCAATCATCTCAGTGGTACAAACAAGTCGAAGATCTTCGGGAAACTTATGAAGCTGATGAGAGGCAAAGATAATAGTAGTAATCTCAGTAGTAGAGTTACATCTTTAGAAAAATATAGATCTAGAGAAGATAGCACTAACAATTCTCCACTTGGAGCTTATCGGAGTGAGTACGGAACTCCTACCGAAACGTCTCGAAATTCTCTCGATCTCAACCGTGCCTTGAGTTCGAAGGAAGATAATAGGAGAAATTCAGATGTTGGAAGCTCAAAGAATTTCAGTCCAAGTACAAGTGGTGCAGGAGATTTGAAAAATAGTTTTCATTCGTTCTCCGAGTCCTATAGCTCAGAGAAATCTAATTTGATCAAATATGCCGAAGCTTTAAAAAATTCTAGTTCTAGTGAAACTTCGAAACATGTTGTACGTAGAAGATCAGCATCATATAGTTCATTTTAA 1734 0.3731 MRPIILKCGLALALTFAGFLYSHFRTRRIKPSPKGHLSGHGSEVNLRGIRASSSSSNFRSEGYNFDTEETCINKVVCRSSPIGVSPRTKQTDEKDDELNDPPIAYASLEKDDYEQEIRKLRNMVMMLQERERNLEVQLLEYCGLREQETVVMELQNRLKISNMETKMFNLKFETLQSENRRLEAQVADHAKVLADLEASKTKVKFLKKKIKYEAEQNKEHIVNLKQKVSKLQDLESKAIANDQEIQMKLKRVKDLEAEVEHWRKSNLRLEKDNSDLARKLDSTQILANSVLEDPEADALREESDRLKRENERLMKEIEQLQADKCTDLEELVYLRWINACLRHESRNYQPPNGKTVARDLSKSLSPDSEKKAKQLILEYANTEGRTSSISSDFDSDQWSSSQASFVIDGDECSPLENSSDARVKDNSNHLSGTNKSKIFGKLMKLMRGKDNSSNLSSRVTSLEKYRSREDSTNNSPLGAYRSEYGTPTETSRNSLDLNRALSSKEDNRRNSDVGSSKNFSPSTSGAGDLKNSFHSFSESYSSEKSNLIKYAEALKNSSSSETSKHVVRRRSASYSSF 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00468 577 Coils Coil 245 272 - -
Trre15g00468 577 MobiDBLite consensus disorder prediction 449 533 - -
Trre15g00468 577 MobiDBLite consensus disorder prediction 409 434 - -
Trre15g00468 577 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 3 463 IPR040265 -
Trre15g00468 577 MobiDBLite consensus disorder prediction 513 533 - -
Trre15g00468 577 Coils Coil 144 164 - -
Trre15g00468 577 Coils Coil 103 137 - -
Trre15g00468 577 MobiDBLite consensus disorder prediction 348 362 - -
Trre15g00468 577 MobiDBLite consensus disorder prediction 554 577 - -
Trre15g00468 577 MobiDBLite consensus disorder prediction 419 434 - -
Trre15g00468 577 Coils Coil 172 199 - -
Trre15g00468 577 MobiDBLite consensus disorder prediction 347 369 - -
Trre15g00468 577 Coils Coil 214 237 - -
Trre15g00468 577 Coils Coil 296 323 - -
Trre15g00468 577 MobiDBLite consensus disorder prediction 471 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00468 Trre-Chr15 3375002 3377873 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00468 - - gmx:100781632 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00468 15 3375002 3377873 Trre15g00468 15 3375002 3377873 ECH
Trre11g04683 11 58324221 58326485 Trre15g00468 15 3375002 3377873 PCT