Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04683 ATGATCAAGAAGGAGAAGGGTATGAAGCCTATTTTAGTCAATTTTGGTTTGGCTTTGGCTATTTCTTTTGCTGGATATATCTGCTCACGCCTCAGAATCACAACAATCAACCACTCTTCTAACTCACCTACTTCAGGTCATGAAAGTGAAGTTGATTTAGGAGAAGATTTTGGAGCAACATTCAGTACTTCTAACACTGTTTCAGAGGAAGAAACACACACCAACGAGTTGAAGAGTGAAAATTCTCCTATTGGTCTTCTCAGTAACAGTAAACAAAACGGTGATAAAGATGAGTTCCTCCTACCTGAATTTGACGAGCTCGTTAAGGAGGTTGAGTTTGAAGTAGAGGCGCCGAGGTTAAAAGTAGGATCTTCTAGAGGATATACAGTTCCTAATAAGGATGACTATGAACAAGAGATAAGTCATCTCAGAAACATGGTTAGATTGCTTCAAGATAAGGAACAAAATCTTGAGTTTCAGTTGCTTGAGTACTGTGGTCTTAGAGAGCAAGAAACAGTTGTGATGGAGCTTCAAAATCGTTTGAAGATAAGTAATATGGAGGTAAAGATGTTCAATCTGAAGGCTAAAAACTTGCAGTCTGAGAATCGGAGATTAAAAGAACAGGTCGCCGATCATGCAAAGGTGCTGGCTGAGTTGGACACCGCAAAGGCAAAAGTCGAACTGCTCAATAAGGAAATCAGGTGTGAAGCTGAACAAAATAAGGAACAGATCATTACTCTTCAACAAAGAGTGGCCAAGTTGCAAGACCAAGAATGCAAAGATGCTGCTTGTGATCAAGATATTAAAGTAAAGCTGCAAAAGCTAAAGGTTCTTGAGTTGGAAGTAGAAGAGTTGAGGAAATCTAACTCAAGATTGCATATAGAGATTTCTGACTTGACTCGAAGATTCGATTCTACGCAGATTGTTGCTAATGATGCGAACCGAGAAAGTGAGCGTCTTAGAAAAGAAAACGAGGACTTGATGAAGCAAATTGAACAACTACAATCCGATCGATGTTCAGATCTTGAAGAATTAGTGTACATGCGGTGGTTAAACGCTTGTTTACGATATGAGCTGCGAAATTATCAGCCTCCACACAGTAAAACAGTTGCAAAGGATTTGAGTAAAAGCCTAAGCCCCAATTCTGAGAAGAAAGCCAAACAGCTTATACTTGAATATGCTAATACTAATGAATCAGGGAGTATTGTGGACATTGATTTTGATCAATGGTCCTCCTCGCAAGCTTCTTCTATTACTGACTCTGGAGAGTATGATGATTTTTCTTCTGTTGATAATTCATCTGCTGTTAGAACTAACACCAAATTTTTTAGCAAGCTTAAGAGACTGATACAAGGAAAGGATAGTCGTCATCATGATAGTCGGGTTTCAACTAGATATCAAGAAGATATAAGTTCTCCACCGCCGAGTACATCAACCGGAATTGATCGTAGAGCGTCCTTTGATTTCTCAACATTGATGAGTATGAAGGAAAGGAATAGGAGATATTCAAGTTTAAGTAGAGATGGTTCCTTACCAGGTTCTTTAGGCATAGAGAAATCCAATTTGGAGAAATACGCAGAAGCTCTAAACGATTCTAGTGTGAATACTAAATATCAAAAACGTGGAAGATCAACATCATTTAGTTAG 1647 0.3868 MIKKEKGMKPILVNFGLALAISFAGYICSRLRITTINHSSNSPTSGHESEVDLGEDFGATFSTSNTVSEEETHTNELKSENSPIGLLSNSKQNGDKDEFLLPEFDELVKEVEFEVEAPRLKVGSSRGYTVPNKDDYEQEISHLRNMVRLLQDKEQNLEFQLLEYCGLREQETVVMELQNRLKISNMEVKMFNLKAKNLQSENRRLKEQVADHAKVLAELDTAKAKVELLNKEIRCEAEQNKEQIITLQQRVAKLQDQECKDAACDQDIKVKLQKLKVLELEVEELRKSNSRLHIEISDLTRRFDSTQIVANDANRESERLRKENEDLMKQIEQLQSDRCSDLEELVYMRWLNACLRYELRNYQPPHSKTVAKDLSKSLSPNSEKKAKQLILEYANTNESGSIVDIDFDQWSSSQASSITDSGEYDDFSSVDNSSAVRTNTKFFSKLKRLIQGKDSRHHDSRVSTRYQEDISSPPPSTSTGIDRRASFDFSTLMSMKERNRRYSSLSRDGSLPGSLGIEKSNLEKYAEALNDSSVNTKYQKRGRSTSFS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04683 548 Coils Coil 133 153 - -
Trre11g04683 548 MobiDBLite consensus disorder prediction 466 484 - -
Trre11g04683 548 MobiDBLite consensus disorder prediction 453 484 - -
Trre11g04683 548 Coils Coil 268 302 - -
Trre11g04683 548 MobiDBLite consensus disorder prediction 529 548 - -
Trre11g04683 548 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 9 466 IPR040265 -
Trre11g04683 548 Coils Coil 167 257 - -
Trre11g04683 548 Coils Coil 310 337 - -
Trre11g04683 548 MobiDBLite consensus disorder prediction 64 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04683 Trre-Chr11 58324221 58326485 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04683 - - psat:127087411 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04683 11 58324221 58326485 Trre11g04683 11 58324221 58326485 ECH
Trre11g04683 11 58324221 58326485 Trre15g00468 15 3375002 3377873 PCT