Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00432 ATGGAAAACAATGTACCAATAATAACTAAGAGAGTATGGAGCATGATACGTGTGGCCTTGTTTATGTTAAGGAAAGGCATATCAAAGGGAAAATTGATGATGGATCTCAACATGATGGTCAAACGCCGCGGCAAGCTTGCCGGAAAAGCCATCACCAACCTCATGTTCCACCACGGTGGCTCCACCTCAAGCCGCCGTTCCCATGTAGACACTCGCCTCTCTACCACGAGGGAGTATGAGTTTAGCTGCAGCAACACACCAAATTACAAATTTGCCCTTAACAACAAGCGTCACCGCAACAACTACTTCTCTGCGTGTGCTCACGCTCCTCTCACACAAGACGAAGACATTGTAACCGTTAATGCGGTTAAGGCTGTGTTGGAGAATATGATAAATAATAATGAGGTTATAGTTGAGGCTTCCCCGGCACTTCCTGGTTTCGGACGGACACCTAAGGTAAGGCAGTTGAGGGTGACTGACTCGCCTTTCCCATTGAATGACATTGAGACGGACGCCGAGGTGGACAAGGCTGCCGATGCTTTCATAAAGAGGTTCTACTTGCAGTTGAGGAAGCAAGATTGA 582 0.4742 MENNVPIITKRVWSMIRVALFMLRKGISKGKLMMDLNMMVKRRGKLAGKAITNLMFHHGGSTSSRRSHVDTRLSTTREYEFSCSNTPNYKFALNNKRHRNNYFSACAHAPLTQDEDIVTVNAVKAVLENMINNNEVIVEASPALPGFGRTPKVRQLRVTDSPFPLNDIETDAEVDKAADAFIKRFYLQLRKQD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00432 193 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 4 192 - -
Trre15g00432 193 Pfam Cotton fibre expressed protein 171 192 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00432 Trre-Chr15 3070053 3070634 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00432 - - psat:127076491 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00432 15 3070053 3070634 Trre11g04708 11 58574668 58575270 ECH
Trre7g05713 7 62315577 62316188 Trre15g00432 15 3070053 3070634 ECH
Trre11g04708 11 58574668 58575270 Trre15g00432 15 3070053 3070634 ECH
Trre15g00432 15 3070053 3070634 Trre15g00432 15 3070053 3070634 ECH
Trre11g04708 11 58574668 58575270 Trre15g00432 15 3070053 3070634 PCT