Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04708 ATGGAAAGCAATCTACCAGTGATGTCAAAGAGAGTATGGAAAATGGTACGTGTGGTATTCTTCATGTTAAGAAAAGGCATGTCAAAGGGAAAATTAATGATGGGCCTAAACATGATGCTCAAACGCCGTGGAAAGCTTGCCGGAAAAGCCATTGCCAATTTAATGTTCCACCATCACGGCCATCACAACAACGGCCGCTCCACCTCAAGCCGTCGCTCCCATGATTCACACCACCAATTCACCACCTCAAAGGAATACGAATTTAGCTGCAGCAACACTCCCCACCACTTCTTCCCAATAGGGAAGCGTCACCGCAACCACAGTAATTTCTTCACTTGTGCTCACGTGCCACCTACACAGGATGATGATGTGGCAACAATGAGCGCAATGAAGGCAGTGTTGGAAATGCTTAACAATGATCAAGCGATTGTGGAAGCATCTCCTGCACTGCCTGGATTTGGGCAGAGCCCAATGGTGAGGCAATTGAGGGTGACTGACTCGCCATTTCCTTTAAAAGAAGATGATGAGAAGGACAATCAAGTTGATAAGGCTGCTGAAGATTTCATAAATAGGTTTTACAACCAATTGAGGAAGCAAGATTGA 603 0.4561 MESNLPVMSKRVWKMVRVVFFMLRKGMSKGKLMMGLNMMLKRRGKLAGKAIANLMFHHHGHHNNGRSTSSRRSHDSHHQFTTSKEYEFSCSNTPHHFFPIGKRHRNHSNFFTCAHVPPTQDDDVATMSAMKAVLEMLNNDQAIVEASPALPGFGQSPMVRQLRVTDSPFPLKEDDEKDNQVDKAAEDFINRFYNQLRKQD 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04708 200 MobiDBLite consensus disorder prediction 58 80 - -
Trre11g04708 200 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 4 199 - -
Trre11g04708 200 Pfam Cotton fibre expressed protein 178 199 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04708 Trre-Chr11 58574668 58575270 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04708 - - gmx:100786928 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00432 15 3070053 3070634 Trre11g04708 11 58574668 58575270 ECH
Trre7g05713 7 62315577 62316188 Trre11g04708 11 58574668 58575270 ECH
Trre11g04708 11 58574668 58575270 Trre15g00432 15 3070053 3070634 ECH
Trre11g04708 11 58574668 58575270 Trre11g04708 11 58574668 58575270 ECH
Trre7g05713 7 62315577 62316188 Trre11g04708 11 58574668 58575270 PCT
Trre11g04708 11 58574668 58575270 Trre15g00432 15 3070053 3070634 PCT