Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00092 ATGGGTTGCACGGCGTCTAAACTCGACAACGAAGAAACGGTACGGCGGTGCAAGGAGCGCCACCGTCTCATGAAGGAAGCAGTTTACGCTCGCCATTACCTAGCGGCGGCGCACTCCGATTACTGTAACTCTCTTCGCCTTACCGGTTCTGCACTCTGCACCTTCGCCGCCGGTGAACCTCTCGCCGTCTCCGACGACATCCCCGCCGTTTTCGTCAACACTACTACGAAGAAAACTCACCAGCCACCACCTCCTCCTCCTTCCGCCACCGTAACAACCTCCAAACTTCCGAACACTTCAGAAACTCGTCGCCGGAAACCACCGCCGAAGCTTCCACACATTCTATCCGATTCAAGTGTTTGTTCAACGCCGAGAAGCGAGTTTCCGAACTGGTTCTTCCCAACCGCACACCAAGCTCCATCCACAGCTTCCGAAACCTCTTCAGTTTGGAATTGGGAGAATTTTCATCCTCCTCCGTCTCCACCAAATTCCGAATACTTCCGGCAGCTATCTCAGCCGCCGAATCACAAATCTAAAATTCCTAATCTCGAAGCTACAGGTTCCGATTCAGAATCAGACTCTTTTTACAACATGTTCCACTCGAAAAGTCATATTCAGAAACTCAAAATCCAAACTATAAACGGTTATTCTCAAAATCAGCATCAACTGAACAGTTCGAAAGCTGAAGGTTTCGAGAGGGAGAGATCCGAACCAGAACCGGAACCGAAACCAGAACCAGATCCAGATCGATCAGAAACGGAGCGAGAGGAGGTTCGATGCAGTGATTGGGAAGACTGTTACGGATCAACGAGCTCGTCCGACAGAGAGGAAGAAATTGACGGTTTGAGATCATCGGTGAAACCCGAGTCGGTTACCGGCGGTGATATTCCGGCGAGAAAAGATGAGAAAACCGGCGAGGTGAAAGAGGAAAAGGTTACGATGAAGCATAAGGATTTGAAAGAGATTGTTGAGGCGATTAGTGAGAATTTTGAGAAAGCGGCGATGGCCGGAGATGAGTTATCTGAGATGTTACAGATTAGTAGGGCTCAGCTTGATCGGAGTTTCAGTCAATTGAAAAAAATAGTGTATCACTCGAGTAATTTATTGAGTAACGTGAGTTGGTGTTGGACTTCAAAGCCGCCATTGGCAGTTAAGTACCGGTTCGATGCCGGTTCACTTGAAGGACCGGGCGGTCCGAAGAGCCTCTGCTCCACTTTAGACCGGCTTTTGGCTTGGGAAAACAAACTCTGGCAGGAAGTGAAGGCTAGAGAATGTGTGAAGATTGAGCATGAAAAGAAATTGTCAGCTATGCAAAGTCAAGAATGGAAGGGAGATGATGAAGCTAAGATAAACAAAACCAAAGCTACCATAACAAGGTTACAGTCACTAATTATTGTAACATCACAAGCTGTGTCTACTACCTCAGCTGCCATTGATGGTCTTAGAGACTCTGATCTTGTTCCTCAGCTTATTCAGCTTTGTCATGGAATCATTCACATGTGGAGATCAATGCACCAGTACCATGAAACGCAAAGCAAAATTGTACAGCAAGTTCGCGGTCTTGTGAACCGATCATCGAAAGGTCAGTCGACATCTGAATCGCACAAACAAGCAACTCGAGATCTCGAATCAGCTCTGTCAGCTTGGAACTCAAGTTTTATCCGGATCATAAAATTTCAAAGAGACTTTATTCTATCTCTACATGGATGGTTTAAGCTGAACCTTATTCCAGTCAACAATGACAAAAACAATAACAAAATTGAACAATCTGATTCATTTTACTTTTGTGATGAATGGAAACTTGCCCTTGACCGTGTTCCAGACACAGTTGCTTCGGAAGCAATCAAAAGCTTCATCAATGTTGTCCATGTAATTTCTGTTAAGCAATGTGAAGAACTCAAGGTTAAAAAGAAAACTGACACTGCTTTCAAGGAACTTGAGAAAAAATCTTCATCTCTAAGTAACATTGAAAAGAAGTTTTACAACTCATATTCTATGGTTGGTATTGGAATAATTCCAAACTCGGTGGATGATATTAGACAAGGCTTGGATGCAAGAGACCCTCTTGCTGAGAAAAAATTGGAACTAGAAGCTTTCCAAAGACGCGTTGAAGATGAAAAGATGAAACATTCAAAGGCAATTGAGGTTACAAGAGCTATGACACTTAACAATCTACAGACAGGTTTGCCTGGAGTGTTTCAGGCTTTGACAAGTTTTTCTTCATTATTTATTGAGGTTTTTGAATCAGTATGTGCCCGTTCATATGCCATCAAGTAG 2277 0.4427 MGCTASKLDNEETVRRCKERHRLMKEAVYARHYLAAAHSDYCNSLRLTGSALCTFAAGEPLAVSDDIPAVFVNTTTKKTHQPPPPPPSATVTTSKLPNTSETRRRKPPPKLPHILSDSSVCSTPRSEFPNWFFPTAHQAPSTASETSSVWNWENFHPPPSPPNSEYFRQLSQPPNHKSKIPNLEATGSDSESDSFYNMFHSKSHIQKLKIQTINGYSQNQHQLNSSKAEGFERERSEPEPEPKPEPDPDRSETEREEVRCSDWEDCYGSTSSSDREEEIDGLRSSVKPESVTGGDIPARKDEKTGEVKEEKVTMKHKDLKEIVEAISENFEKAAMAGDELSEMLQISRAQLDRSFSQLKKIVYHSSNLLSNVSWCWTSKPPLAVKYRFDAGSLEGPGGPKSLCSTLDRLLAWENKLWQEVKARECVKIEHEKKLSAMQSQEWKGDDEAKINKTKATITRLQSLIIVTSQAVSTTSAAIDGLRDSDLVPQLIQLCHGIIHMWRSMHQYHETQSKIVQQVRGLVNRSSKGQSTSESHKQATRDLESALSAWNSSFIRIIKFQRDFILSLHGWFKLNLIPVNNDKNNNKIEQSDSFYFCDEWKLALDRVPDTVASEAIKSFINVVHVISVKQCEELKVKKKTDTAFKELEKKSSSLSNIEKKFYNSYSMVGIGIIPNSVDDIRQGLDARDPLAEKKLELEAFQRRVEDEKMKHSKAIEVTRAMTLNNLQTGLPGVFQALTSFSSLFIEVFESVCARSYAIK 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00092 758 Pfam Protein of unknown function (DUF632) 319 623 IPR006867 -
Trre15g00092 758 MobiDBLite consensus disorder prediction 152 195 - -
Trre15g00092 758 PANTHER UNCHARACTERIZED 1 752 - -
Trre15g00092 758 Coils Coil 689 709 - -
Trre15g00092 758 MobiDBLite consensus disorder prediction 165 195 - -
Trre15g00092 758 MobiDBLite consensus disorder prediction 75 119 - -
Trre15g00092 758 MobiDBLite consensus disorder prediction 220 306 - -
Trre15g00092 758 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Trre15g00092 758 MobiDBLite consensus disorder prediction 227 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00092 Trre-Chr15 655518 659729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00092 1 85 Acyl Lipid Metabolism Gene Families AT2G27090 29.787 1.57e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00092 - - gmx:100792843 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00092 15 655518 659729 Trre15g00092 15 655518 659729 ECH
Trre15g00092 15 655518 659729 Trre13g02207 13 19429504 19435052 PCT