Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02207 ATGGGTTGCACTGCTTCCAAGCTAGAAAATGAAGACACAGTACGACGATGCAAAGACCGTCGCCGTCTCATGAAAGAAGCTGTCTACGCGCGTCACCATCTCGCCGCCGCACACTCCGACTATTGCCGTTCTCTCCGCCTCACCGGCACCGCTCTTTCCACATTCGCCTCCGGTGAACCTCTCTCTGTCTCCGATAACACCCCCGCCGTATTCATCAACCATAAAACAACCACCACTCCCACCACCACAACAACAACCTTCCACCACCCACCACAACCACAACCACCGCCACCTTCTTCCTTCCACCGTCCACCACCACCGCAACCATTTCACCCTTCACCTTCTCCGACCATAACATCCTCAAAACTCCCACACATCTTATCTTCCTCATCCATCCCTTCCACCAACCAAAACCACCACCCTCGCCGCCGTAAACAACCGCCACCAAAACTCCCTCACATTCTCTCCGATTCAAGCCCTTCTTCCACTCCACGTAGCAATGCCTCCAACAATTTCGCTTCCAATTTCTTCCCTACAGCACATTCCACATACTCTTCAACTCCTTCTCAAACTTCCTCTGTTTGGAACTGGGAAAATTTCTACCCTCCTCCTCCACCACCACCTGGTTCCGATTACTTCGATCGAGAACAAGAACATGAAAATGAACATGAAGATTCTATTTCACAATTCTCTTTCAAGTCAAGAAATAGTGAAGTTCCTTATTCCCGACAACAACCTCAACCTCAACAACAACAACAACAACCTCAGCAACAACAACAACAACAAACACAGACACAAACATATCAACAACAACAACGTTATGTTAATCCAACAGCTCATGAAGTTGAAGGATTTGATTCTGAGAGATCCGAATATGATTATTTTAACGGAAAACTAGCAACGGTTCAGAAGAATCATCAACATCATCATTTGGAGGAAAACACTGAGACTGAGAGAGAAGAAGTTGAGTGTAGTGAATGGGGAGATCATTACAGTACAACAACATCATCTGAGGATGATAATGATCATGATCATGATGATGGAGTTGATGGTGATGTTGATTCAAGGTCTGAGATTGGAACTAGGTCGAATTTCGGGTCATCTTCTGCGGCGGCTAAAGGGTATGTAGCGACGGTGGGGAAATCGGACGACGTGGCATCATCGTCTTCGACGGGTGAAGGAATGATAGAGATGAAGATGGTGGTGAGGCATAGAGATTTGAAGGAAATTGTTGATTCTATTAAGGAGAATTTCGATAAAGCTGCTGTTGCTGGAGATCAGGTTTCTGAGATGCTTGAGATTAGTAAAGCTCAGCTTGATCGAAGTTTCAGACAATTGAGGAAAACTGTGTATCACTCAAATAGCTTATTGAGCAGCCTTAGTTCAACTTGGACCTCAAAACCACCATTGGCAGTTAGGTACCGGCTTGACACTGGTTCATTGGACGAACCGGGTGGTGGTCTGAAGAGTCTATGCTCCAGTTTGGAACGGCTTTTGGCTTGGGAGAAGAAGCTCTATGAAGAAGTTAAGACTAGAGAAGGTGTGAAGATTGAACATGAAAAGAAATTGTCGGCACTGCAGAGTCAGGAATACAAAGGAGACGATGAAGCAAAGATATTCAAAACCAAGTCAGCCATAAATAGGCTGCAGTCACTAATTGTTGTTACATCACAGGCTGTGTCTACCACCTCGACCGCGATTATTGGCCTTAGAGACTCTGATCTTGTTCCTCAGCTTGTTGAGCTTTGTCATGGAATGATGTACATGTGGAGATCGATGCATCAGTACCATGAAATCCAAAGCAACATAGTGCAGCAAGTCCGTGGTCTGGTGAACAGATCGGGAGGTGATTCAACTTCTGAACTGCACAGGCAAGCAACTCGTGACCTTGAATCGGCTGTCTCGGCTTGGCATTCTAGTTTTTGTCGGCTTATAAAATTTCAACGGGACTTTATTCTCTCCTTACACGGTTGGTTTAAGCTTAGCCTTATTCCGGTTGATAATGACAACAACAACAACAGAATGGAACACTCTGATGCATACATGTTTTTTGATGATTGGAAGCTTGCACTTGACCGTGTCCCCGACACAGTTGCATCGGAAGCTATCAAAAGCTTTATCAATGTTGTCCATGTCATATCTTCCAAACAAGCTGAAGAACTCAAAATAAAGAAGCGAACCGAGAATGCTTCCAAGGAACTCGAGAGAAAGGCTTCATCCGTACGAAATATAGAAAGAAAGTTTTACAGCTCGTATTCTATGGTAGGAATTAGCCTTCCTGACACGGCGCCTGATAACGGACAAGGCTTGGATGCGCGCGATCCACTTGCTGAGAAAAAATTGGAACTAGCAACCTGTCAAAGGCGCGTTGAAGACGAAATGATGAAGCATTCGAAAGCTGTAGAGGTAACAAGAGCAATGACACTCAACAATCTACAAACAGGCTTGCCTGGAGTCTTCCAGGCGTTGACCAGTTTTTCTTCGTTGTTCACTGAGGCTCTTGACTCGGTGTGTACTCGTTCGTATGCCATCAAGTAG 2538 0.4531 MGCTASKLENEDTVRRCKDRRRLMKEAVYARHHLAAAHSDYCRSLRLTGTALSTFASGEPLSVSDNTPAVFINHKTTTTPTTTTTTFHHPPQPQPPPPSSFHRPPPPQPFHPSPSPTITSSKLPHILSSSSIPSTNQNHHPRRRKQPPPKLPHILSDSSPSSTPRSNASNNFASNFFPTAHSTYSSTPSQTSSVWNWENFYPPPPPPPGSDYFDREQEHENEHEDSISQFSFKSRNSEVPYSRQQPQPQQQQQQPQQQQQQQTQTQTYQQQQRYVNPTAHEVEGFDSERSEYDYFNGKLATVQKNHQHHHLEENTETEREEVECSEWGDHYSTTTSSEDDNDHDHDDGVDGDVDSRSEIGTRSNFGSSSAAAKGYVATVGKSDDVASSSSTGEGMIEMKMVVRHRDLKEIVDSIKENFDKAAVAGDQVSEMLEISKAQLDRSFRQLRKTVYHSNSLLSSLSSTWTSKPPLAVRYRLDTGSLDEPGGGLKSLCSSLERLLAWEKKLYEEVKTREGVKIEHEKKLSALQSQEYKGDDEAKIFKTKSAINRLQSLIVVTSQAVSTTSTAIIGLRDSDLVPQLVELCHGMMYMWRSMHQYHEIQSNIVQQVRGLVNRSGGDSTSELHRQATRDLESAVSAWHSSFCRLIKFQRDFILSLHGWFKLSLIPVDNDNNNNRMEHSDAYMFFDDWKLALDRVPDTVASEAIKSFINVVHVISSKQAEELKIKKRTENASKELERKASSVRNIERKFYSSYSMVGISLPDTAPDNGQGLDARDPLAEKKLELATCQRRVEDEMMKHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALDSVCTRSYAIK 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02207 845 MobiDBLite consensus disorder prediction 305 367 - -
Trre13g02207 845 MobiDBLite consensus disorder prediction 115 137 - -
Trre13g02207 845 MobiDBLite consensus disorder prediction 155 198 - -
Trre13g02207 845 MobiDBLite consensus disorder prediction 230 277 - -
Trre13g02207 845 MobiDBLite consensus disorder prediction 305 357 - -
Trre13g02207 845 MobiDBLite consensus disorder prediction 89 114 - -
Trre13g02207 845 Coils Coil 724 747 - -
Trre13g02207 845 MobiDBLite consensus disorder prediction 77 289 - -
Trre13g02207 845 Pfam Protein of unknown function (DUF632) 407 711 IPR006867 -
Trre13g02207 845 PANTHER UNCHARACTERIZED 1 839 - -
Trre13g02207 845 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Trre13g02207 845 MobiDBLite consensus disorder prediction 212 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02207 Trre-Chr13 19429504 19435052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02207 493 659 Acyl Lipid Metabolism Gene Families AT2G27090 36.471 2.38e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02207 - - gmx:100815888 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02207 13 19429504 19435052 Trre13g02207 13 19429504 19435052 ECH
Trre15g00092 15 655518 659729 Trre13g02207 13 19429504 19435052 PCT