Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00008 ATGGCATATAGGAGAAGGCAGGTTGTAACGAGGAGTTCCACCTTCAAAGAAGAGATTAATACTAATGGTGGGCAGGAATTATTAGATAATTCAGATGAACAGGATGGTTCTAATACAGCTCCTCCACTTTTGAATTCAATCACATCATCATCATCATCTAATAGTTCCCTTGCTGCTCAGGCCATCAAAGCCTCTGCTACTCGTCGTGATCCCTCTCATTCCTTGGCTTTCACTGCCAATTCTTCTTTAGCTCAACATGATCATCATCACAGATCCAAGAGCCTTGATTCTTTTGGGGATGCTTCCGGGGATGCATCCAAGTCTGGTTTCTGGGGCGTCCTCGCACAGAAAGCTAAAGAAATTTTGGAGGATGACAATCCATCTGCACAATCTCATGATAATGACATCACGTCCGCCCAAAAACTCAGATCACAATCTTTCAATACCACCTACATCCCCGGTGCTCGAGCTCAGGAAGGTCGAACAATTGGGGAGAGTAAGCTAAAAGGATGTGAAGACGCAAATCAATTAATGTGGAATCCATGGCAACAACAATCCGCCCAGACAGCAGGGACCGCCGATTCTCAATATATCCACGAGACACAACTCAAGGCATCTCGCGACGTGGCAATGGCAACAGCTGCAAAAGCAAAGTTACTTCTGCGAGAGCTAAAAACGGTGAAAGCAGATTTGGCTTTCGCTAAAGCACGGTGTGCTCAACTAGAAGAAGAAAATAAACTACTCCGTGACAAAGAGGGTCGCGAGAAGGGACAGAACCGTGCAGATGATGATCTGATCCGGCTTCAACTGGAGACACTTCTTGCGGAGAAGGCTCGATTGGCAAGTGAGAATGAGGTGTATTCTCGTGAAAACCGTTTTCTACGGGAAATTGTGGAATACCATCAGCTGACAATGCAGGATGTGGTGCATTTTGACGAAGGCATGGAAGAAGAGGATGATATTTATGCACCCATAGACACCACTCAAAATGGAAATATTATTCCCTTGATGCTGTCCCCGCGCTCACAATTATCAGGTCGATCCATGAACTCAAAATCAATATTTTCTTCTGTGCCACAACAACAGGATCAGAATGAATCATCACAAGATGGAGCTCCTCCTGCTCCTAGTATCCCACCCTCAGAGTCTAATGATCAGCATGCAAAATGA 1170 0.4521 MAYRRRQVVTRSSTFKEEINTNGGQELLDNSDEQDGSNTAPPLLNSITSSSSSNSSLAAQAIKASATRRDPSHSLAFTANSSLAQHDHHHRSKSLDSFGDASGDASKSGFWGVLAQKAKEILEDDNPSAQSHDNDITSAQKLRSQSFNTTYIPGARAQEGRTIGESKLKGCEDANQLMWNPWQQQSAQTAGTADSQYIHETQLKASRDVAMATAAKAKLLLRELKTVKADLAFAKARCAQLEEENKLLRDKEGREKGQNRADDDLIRLQLETLLAEKARLASENEVYSRENRFLREIVEYHQLTMQDVVHFDEGMEEEDDIYAPIDTTQNGNIIPLMLSPRSQLSGRSMNSKSIFSSVPQQQDQNESSQDGAPPAPSIPPSESNDQHAK 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00008 389 Coils Coil 270 290 - -
Trre15g00008 389 Coils Coil 217 251 - -
Trre15g00008 389 MobiDBLite consensus disorder prediction 1 54 - -
Trre15g00008 389 MobiDBLite consensus disorder prediction 7 54 - -
Trre15g00008 389 MobiDBLite consensus disorder prediction 342 372 - -
Trre15g00008 389 MobiDBLite consensus disorder prediction 342 389 - -
Trre15g00008 389 MobiDBLite consensus disorder prediction 82 101 - -
Trre15g00008 389 PANTHER UNCHARACTERIZED 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00008 Trre-Chr15 140073 141635 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00008 - - psat:127121594 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01890 13 16090036 16092643 Trre15g00008 15 140073 141635 PCT