Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01890 ATGGCGTATAGAAGAAGACAAGGCATAACAAGAGCTTCAACATTCAAGGAAGAATTTCATTCATCATTGGATGATCCTAAAGATTCTGATCTTCAAAATGGTTTCGTCTCTTCTTCTAATTCTTCGCTATCCGTTCAAGCCATTAAAAACTCTTCTGCTCGTCATCAACCCGCTCTTTCCTTCGCTTTGGACCCTTCTCATCCTGACCATCAACAACGATCTACGAGTTTTGATGCTTATGGAAATGATAACAACAAGTCTGGTTTTTGGGGTGTTTTGGCTCATAAAGCCAAATCAATGTTGGATGAAAACAATTCAGGTTCACAACAACATGACACCAAGCCACAAACACTCAAATCACACTCATTTAATACTTTTACTAGCCCCTTTTCATCACAGCCATTATCTCAAGCTCCTGAATCTAATAAAAGAATGGACAATCCTTCGATTCGGAAGGGCTTAGATGCAATCTCTTCTTCCCTCAATCAACTAGGTGACACCTTTGAGAAGGCTTATGAGGAAGGCAAAACAATTGTGGAGAATAAGACTGCAGACCTGAGATCGCAAATCAGGCGAAAAGGAAATGGACCTGAGGACATATACCAAGCTTCAGATCAGACGCAGGGTCCTACTCGCCATGAAACACAACTCAAGGCATCTCGCGACGTGGCAATGGCAACAGCTGCAAAAGCAAAATTACTTCTTCGCGAGCTAAAAACCGTTAAAGCGGATTTAGCATTTGCTAAAGCACGAAGTTCTCAACTTGAAGAAGAAAATAAATTACTCAGGGAACGAGAAGGCAGCGATAAGGGACTTAATCATAATGACGATGATCTGATTCGGCATCAACTGGAGACGCTTCTAGCTGAGAAGGCTCGTTTAGCTAACGAGAATGAGACATATTCAAGGGAAAACCGTTTCCTGAGGGAAATTGTGGAGTACCATCAGCTGACAATGCAGGATGTGGTGTATCTTGATGAGGGAATGGAAGAAGTCACTATGGATGACAATGGAATAACTAGGGTTCTATCTATCTCACCACACGCATTATCGCCGAAATCACCTGACGAGGTTGTTCTAGAGTCAACAAAAGTAATGTTTCCTGTACCAGAAGAAGATGATAAGAGTACATCAGATGAAAATGAGACTCTTCCTAATGTCTCACCTTCTCAGCATGCAAAATGA 1185 0.4169 MAYRRRQGITRASTFKEEFHSSLDDPKDSDLQNGFVSSSNSSLSVQAIKNSSARHQPALSFALDPSHPDHQQRSTSFDAYGNDNNKSGFWGVLAHKAKSMLDENNSGSQQHDTKPQTLKSHSFNTFTSPFSSQPLSQAPESNKRMDNPSIRKGLDAISSSLNQLGDTFEKAYEEGKTIVENKTADLRSQIRRKGNGPEDIYQASDQTQGPTRHETQLKASRDVAMATAAKAKLLLRELKTVKADLAFAKARSSQLEEENKLLREREGSDKGLNHNDDDLIRHQLETLLAEKARLANENETYSRENRFLREIVEYHQLTMQDVVYLDEGMEEVTMDDNGITRVLSISPHALSPKSPDEVVLESTKVMFPVPEEDDKSTSDENETLPNVSPSQHAK 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01890 394 MobiDBLite consensus disorder prediction 31 57 - -
Trre13g01890 394 MobiDBLite consensus disorder prediction 10 27 - -
Trre13g01890 394 MobiDBLite consensus disorder prediction 200 214 - -
Trre13g01890 394 MobiDBLite consensus disorder prediction 191 215 - -
Trre13g01890 394 Coils Coil 231 265 - -
Trre13g01890 394 MobiDBLite consensus disorder prediction 103 144 - -
Trre13g01890 394 MobiDBLite consensus disorder prediction 1 80 - -
Trre13g01890 394 PANTHER UNCHARACTERIZED 1 374 - -
Trre13g01890 394 MobiDBLite consensus disorder prediction 367 394 - -
Trre13g01890 394 Coils Coil 284 311 - -
Trre13g01890 394 MobiDBLite consensus disorder prediction 103 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01890 Trre-Chr13 16090036 16092643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01890 - - gmx:100819083 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01890 13 16090036 16092643 Trre13g01890 13 16090036 16092643 ECH
Trre13g01890 13 16090036 16092643 Trre15g00008 15 140073 141635 PCT