Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04990 ATGACATCAATCAACTTTATTAGTAATTGTACCATGAAACCATCCTCTAGAATTCTCTTACTTGGTCGAAAGAATTCATCTTTTTTCTCAAGATGTTATCATTCTCTTACAATGTCAACATCATTCTCTAATAATCCTCTTGTTCTCAATCTTGGTCACAAAACCAAGCGATACCCTTCTTGCATTTTTGAATTTAAACGTATAATGAATGGTTTTCAACAAGTTTTGCGGCTACCCTCTTGGAATTTAGGCCATTCAAGAACGTTTCTCAATTTAAGAGCAACAAAAACAGAATGTGTATCTTCTATCGGTGGAGTATCCTTCAAGGCACGCGAATTCTCAAATTCTGTTGAGACCAAACGTGGTTTAAGAGTTGGTAAAAATGATAACAAGGGTGGAGGAGATGATGAGGAAGATTTGAAAGAAAAGAATTCGAAGAATGTATCCTTTGGAAAGAAGAATTTTGATGATGAAGAAACAGAAGTCGAGAAAGAAGCATGGAAATTGTTACAGAAAGCACTTGTTACATATTGTGATACACCTGTGGGAACCGTTGCAGCAAATGATGATTCGGGTAACGAATCGCCATTGAATTATGATCAAGTTTTTATTCGAGATTTTATCCCTTCTGCTCTTGCTTTCTTGCTCAAAGGTGAACATGAGATTGTCAAGAATTTTCTCCTTCACACCTTGCAACTCCAGAGTTGGGAGAAGACAGTGGATTGCTATAGCCCGGGACAAGGCTTGATGCCTGCAAGTTTCAAAGTTAAAACTATGGAATTTGATGACAAAAAGACGGGAGAAGTTTTAGATCCTGATTTTGGAGAATCGGCTATTGGTCGTGTTGCTCCTGTTGATTCAGGATTGTGGTGGATCATTCTGCTTAGAGCTTATGGAAAACTCACTGGTGACTATACCTTGCAAGACAAGTTAGAAGTTCAAACAGGCTTACAAATGATCCTTAACTTGTGTTTATCAGATGGATTTGATATGTTTCCTTCTCTGTTAGTAACTGATGGATCTTGCATGATAGACAGAAGGATGGGTATACATGGCCACCCTCTTGAGATTCAAGCATTATTTTACTCGGCTCTTCGCTCTGCGCGCGAAATGGTTGTCAAGAATGATGAAACTAAGAACCTAGTTGGAGAAATTACCAACAGACTAAGTGCACTTTCTTTCCATATTAGAGAATATTATTGGTTGGATATGAGAAAAGTGAATGAGATTTATAGGTATAAAACAGAAGAATACTCTTTAGATGCAACTAACAAGTTCAACATTTATCCTGAACAAATTCCAATGTGGTTAATGGATTGGATTCCTGAGGAAGGTGGTTATTTGATAGGAAATCTACAACCAGCTCACATGGATTTCAGGTTTTTCATGCTTGGAAATCTTTGGTCAATTGTTTCATCTTTAGGTACACCGAAACAAAACAAGTCTGTTTTGAATCTCATAGAATCAAAATGGGATGATCTTGTTGGTCACATGCCTCTTAAGATATGTTATCCTGCCTTGGAGCATGAAGAATGGCGCTTAATCACCGGCAGCGACCCTAAGAATACCCCTTGGTCATATCATAATGGTGGATCTTGGCCTACCCTTCTCTGGCAGTTTACGCTGGCATGCATCAAAATGGGGAGACATGATCTAGCTGAGAAGGCTGTTGTTTTGGCTGAGAAAAGGCTTCCAATTGATTCTTGGCCAGAATATTATGACACAAAAACAGGAAGATTTATCGGAAAACAAGCGCGACTTTTTCAAACATGGACATTGGCTGGATTCCTTGCATCTAAGATGCTTTTGAAGAATCCTGAAATAGCAACCTTGCTATGCTGGGATGAAGATCTTGATATTCTTGAAACATGTGTTTGTACACTTAATAAGAGTGGCAGGACAAAATGTTCTCGAGATGTCGCGAAGTCGCACATTTTAGTGTGA 1944 0.3853 MTSINFISNCTMKPSSRILLLGRKNSSFFSRCYHSLTMSTSFSNNPLVLNLGHKTKRYPSCIFEFKRIMNGFQQVLRLPSWNLGHSRTFLNLRATKTECVSSIGGVSFKAREFSNSVETKRGLRVGKNDNKGGGDDEEDLKEKNSKNVSFGKKNFDDEETEVEKEAWKLLQKALVTYCDTPVGTVAANDDSGNESPLNYDQVFIRDFIPSALAFLLKGEHEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTMEFDDKKTGEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYTLQDKLEVQTGLQMILNLCLSDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVVKNDETKNLVGEITNRLSALSFHIREYYWLDMRKVNEIYRYKTEEYSLDATNKFNIYPEQIPMWLMDWIPEEGGYLIGNLQPAHMDFRFFMLGNLWSIVSSLGTPKQNKSVLNLIESKWDDLVGHMPLKICYPALEHEEWRLITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRHDLAEKAVVLAEKRLPIDSWPEYYDTKTGRFIGKQARLFQTWTLAGFLASKMLLKNPEIATLLCWDEDLDILETCVCTLNKSGRTKCSRDVAKSHILV 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04990 647 Pfam Alkaline and neutral invertase 166 606 IPR024746 GO:0033926
Trre13g04990 647 Gene3D - 197 592 IPR012341 GO:0005975
Trre13g04990 647 FunFam probable alkaline/neutral invertase B 193 599 - -
Trre13g04990 647 MobiDBLite consensus disorder prediction 121 144 - -
Trre13g04990 647 PANTHER - 124 630 IPR024746 GO:0033926
Trre13g04990 647 SUPERFAMILY Six-hairpin glycosidases 164 598 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04990 Trre-Chr13 56022818 56025398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04990 - - gmx:100812691 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04990 13 56022818 56025398 Trre1g04275 1 48396828 48401315 ECH
Trre13g04990 13 56022818 56025398 Trre13g04990 13 56022818 56025398 ECH
Trre13g04990 13 56022818 56025398 Trre1g04275 1 48396828 48401315 PCT