Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04682 ATGGATAAAGTGATGAGGTTGGCATCTGAAAAGGGTGTGGTGATATTCACAAAGAGTTCATGTTGTCTATGTTATGCAGTTAACATTTTGTTTCAAGAACTTAAGATTAGGCCTATGGTTCATGAAATTGATCAAGATCCTGAAGGAAGGGATATGGAGAAAGCTTTGTTGAGGTTAGGTTGTACTGCACCTGTTCCTGCTGTGTTCATTGGAGGGAAACTTATGGGATCTACCAATGAAATTATGTCACTTCATCTAAGTGGTTCACTCACTCAATTGCTCAAACCATATCAATGTCGTTCTTGA 306 0.3856 MDKVMRLASEKGVVIFTKSSCCLCYAVNILFQELKIRPMVHEIDQDPEGRDMEKALLRLGCTAPVPAVFIGGKLMGSTNEIMSLHLSGSLTQLLKPYQCRS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04682 101 Gene3D Glutaredoxin 1 100 - -
Trre13g04682 101 FunFam Glutaredoxin family protein 1 101 - -
Trre13g04682 101 Pfam Glutaredoxin 13 74 IPR002109 -
Trre13g04682 101 PANTHER GLUTAREDOXIN 1 95 IPR011905 -
Trre13g04682 101 NCBIfam glutaredoxin-like family 4 99 IPR011905 -
Trre13g04682 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Trre13g04682 101 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Trre13g04682 101 CDD GRX_GRXh_1_2_like 13 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04682 Trre-Chr13 53908806 53909111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04682 1 95 Miscellaneous Gene Families AT4G15670 46.316 3.59e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04682 K03676 - mtr:11433569 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04682 13 53908806 53909111 Trre13g04682 13 53908806 53909111 ECH
Trre13g04682 13 53908806 53909111 Trre1g04606 1 52145432 52145734 PCT