Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04507 ATGGTAATTTCCACTATCGGCAAAACCATAACAACCGATGAAGAAGGTGGCGTCGCCGCCATCTCCGCCATACATCCAGATATTATCCAAACTCATATCCTCACGTGCCTCGACGGTCCTTCACTCGCTTCCGCATCCACCACGTGCTCTCAGCTTTATAACCTCTCATCAAACAAGCATTTATGGAACAATATTTGCCAATCCACGTGGCCTTCCACAAACACGACACGCGTCCGTCATGTAATTTCCACTTTCCCTAACACCTCTCGTTCTTTCTTCTCCGATTCTTTCTCAACCGTAACCGCTCACACCTTACACCACCGCCACCGTCCAAATCTCGAAAACACGCCAGAAATTTTATCTTCCGTCGATTTATTCCACCGGAAACGGCTTATTTTATCAAAATTAGTGGAGACAGAAACGGTTTCTGGTTGGTTTAGATGTTCTCCGTTTCGGATTGATATTCTTGACCCGAAGGATTCGGTTGAGACGAGTATGGAGTATCCGAGAAACGATGAATCGTGTAAGAATCTGGAAGAGGAATTGACGATGAGTTGGATCGTGATTGATCCGAGAGGGAAGCGTGCGATGAATGTTTCGAGTGGAAAACCGGTGTCGGTTCACCGTCACTGGTTAACCGGAGATGTACAGGCGAGATTCGCGACGGTGTTACACGGCGGAGAGAAAGGATCGGCGACGGAAGTAGCACTGTGTAGTTTATTGGTGACGTTGGGAGGGGAAATGCAAGTGAGGGAAGTGTGTTTTCAGATTGAGGACATGGATGGGATTAATTTGAATGGAAGGGACAGTTTGGGAATTTTACAGAGGGCTTTGGAAGGTGAAAGAAAAAAATTAAGGAGCGAAAAGGAAAGAAAGGAAATATTCGTGGAATTTATGAAAAGGAAAATAGAAAGGAAAGAAAGGAAGTTGAGAAGTGAAAGATGGTTGGATATGCTTTGCGTAGGTATCGCTGCTTTGTCTATCGCGGCTTTTTCCACTCTCTTTCTCTCCTGA 1014 0.4546 MVISTIGKTITTDEEGGVAAISAIHPDIIQTHILTCLDGPSLASASTTCSQLYNLSSNKHLWNNICQSTWPSTNTTRVRHVISTFPNTSRSFFSDSFSTVTAHTLHHRHRPNLENTPEILSSVDLFHRKRLILSKLVETETVSGWFRCSPFRIDILDPKDSVETSMEYPRNDESCKNLEEELTMSWIVIDPRGKRAMNVSSGKPVSVHRHWLTGDVQARFATVLHGGEKGSATEVALCSLLVTLGGEMQVREVCFQIEDMDGINLNGRDSLGILQRALEGERKKLRSEKERKEIFVEFMKRKIERKERKLRSERWLDMLCVGIAALSIAAFSTLFLS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04507 337 PANTHER F-BOX PROTEIN-RELATED 16 331 IPR045283 -
Trre13g04507 337 SUPERFAMILY F-box domain 26 91 IPR036047 GO:0005515
Trre13g04507 337 Gene3D - 18 109 - -
Trre13g04507 337 Pfam F-box-like 26 67 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04507 Trre-Chr13 52593474 52594487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04507 - - mtr:25499417 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04507 13 52593474 52594487 Trre13g04507 13 52593474 52594487 ECH
Trre1g04450 1 50408498 50410042 Trre13g04507 13 52593474 52594487 PCT