Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03713 ATGAAGATTTGTACATTTTCTCTGCTTCTTCTCTGTTTTTTTCAATCAGCGCTAGCAATTTTAGATCCTATTGATTTCTTAGCATTACAATCTATTCGAAGATCGCTTCATGATGTTCCTGGTTCGAATTTCTTTTCGTCTTGGGACTTCACCGGCGATCCATGCAACTTCGCCGGAGTTTATTGTGTTTCTGATAAAGTCTTTGCTCTCAATCTCGGCGAAACTAGAGCCGGTTCGCCTGGTCTCACCGGCAAAATTGATATCGCCATTGGTAAACTCTCTGCTCTTGCTGATTTAACCGTTTCTCCCGGGAGAATTTACGGTCATCTTCCTCAGTCGATTTCGCAGTTGAAGAATCTTAAATTTCTCGGTATCAGCCGGAATTTCATCTCCGGTGAGATTCCGGCAGGGCTTGGTCAGCTACACAATCTCAGAACAATTGATTTAAGCTACAATCAGTTATCCGGAACTATTCCTCCGTCAATCGGAAAATTGCCGGTGCTAAACAACCTCATCCTCCGTCACAACCGTCTCACCGGTTCAGTTCCGTCTTTCGCATCGGCTCAAAACTTAAACCGGCTCGATCTAAAACACAACTCTCTCACCGGTTCACTTGCTCCTGATTCTCTCCCTTCTTCACTACAATATCTTTCTCTATCATGGAATCAACTTACCGGGAATGTAGATCGGGTTTTATACCGGTTAAACCGCCTCAACTATCTCGATCTAAGCTTAAACCGGTTCACCGGTCCAATCCCGGCTCAGTTATTCTCATTCCCGCTAACAAACTTACAGTTAGAAAGAAACCAATTATGCGGTCCGGTTGAACCGTTTAACGAAGTTACAATCCAAACCGTTGATCTAAGTTACAACAAGCTATCAGGTGAAATATCACCTTTATTAGCGAGTGTGCAAAATTTGTATCTAAACAACAACGCTTTTACCGGTGAAGTTCCCGGTAGTTTTGTAGAACGGTTATTGAGGGCGAATATACAGATTTTGTATTTGCAGCATAATTATCTTACCGGAATTGTGATTAATCCAACGGCGGAGATTCCGTTGAGTAGTTCTCTTTGTTTACAGTATAACTGCATGGTTCCTCCTGTTCAGATGACGTGTCCTTCTAAAGCTGGTTACCAGAAAATCAGACCTGCTAGGGAGTGCAACCAACATCATTGA 1179 0.4283 MKICTFSLLLLCFFQSALAILDPIDFLALQSIRRSLHDVPGSNFFSSWDFTGDPCNFAGVYCVSDKVFALNLGETRAGSPGLTGKIDIAIGKLSALADLTVSPGRIYGHLPQSISQLKNLKFLGISRNFISGEIPAGLGQLHNLRTIDLSYNQLSGTIPPSIGKLPVLNNLILRHNRLTGSVPSFASAQNLNRLDLKHNSLTGSLAPDSLPSSLQYLSLSWNQLTGNVDRVLYRLNRLNYLDLSLNRFTGPIPAQLFSFPLTNLQLERNQLCGPVEPFNEVTIQTVDLSYNKLSGEISPLLASVQNLYLNNNAFTGEVPGSFVERLLRANIQILYLQHNYLTGIVINPTAEIPLSSSLCLQYNCMVPPVQMTCPSKAGYQKIRPARECNQHH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03713 392 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 9 390 - -
Trre13g03713 392 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Trre13g03713 392 FunFam Nuclear pore complex protein NUP107 24 184 - -
Trre13g03713 392 Gene3D Ribonuclease Inhibitor 187 377 IPR032675 -
Trre13g03713 392 Pfam Leucine Rich repeat 212 226 IPR001611 GO:0005515
Trre13g03713 392 Gene3D Ribonuclease Inhibitor 25 186 IPR032675 -
Trre13g03713 392 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Trre13g03713 392 SUPERFAMILY L domain-like 29 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03713 Trre-Chr13 44965109 44966287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03713 45 375 Receptor kinase-like Gene Family AT2G25790 30.163 3.83e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03713 - - tpra:123917600 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03713 13 44965109 44966287 Trre13g03713 13 44965109 44966287 ECH
Trre13g03713 13 44965109 44966287 Trre1g04637 1 52456947 52458128 PCT