Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03016 ATGAACACCTCAAATAATAATTTGGCTTCCTCTCCCTCCCCTTCTGTGGCTGTCTCAGTTGAACCTTCCAAAACCAGAAGGCTCTATCAAGTTTGGAAAGGAAACAATAAATTTCTCTTTGGTGGAAGATTAGTGTTTGGTCATGATGCATCATCTCTTTTTTTGACATCGTTCCTGATCGGAGGTCCAGCAATAACATTCTGCATAAGAATGCTATTAATAATGAAGGAAGAAGACACTCTTTTTAACCACCTTGTACTTACTGGAGGAGTGGTCCTCACAATTTTGGATTTTATGTTTCTCTTCATGACATCTGGTAGAGATCCAGGAATTATTCCGAGGAATTCACAGCTACCTGATTCAGATGAATCATGTCACACTAATACAGCATCTATGGAATGGGTAAACAATAGAACTCCTAACCTCAAACTACCTAGAGTGAAGGATGTGGTAGTCAATGGCCATACAGTGAAAGTGAAGTTTTGTGATACTTGCTTGCTCTATCGTCCACCACGTGCTTCTCATTGCTCTATTTGTAATAACTGTGTTCAGAAGTTTGATCATCATTGCCCTTGGGTTGGTCAGTGTATTGGATCGCGTAACTATCCGTTCTTCATATTGTTCATTTCATCATCAACCTTGTTGTGCATATACGTCTTCTCGGTTTCTTGGGTTACCCTTCTTCATCAAAAAGGTTCATTGTGGTCAAACATGTCGCGCGACGTCCTATCAGTTACTCTCATTGCATATTGCTTCATAGCTGTTTGGTTTGTCGGTGGCCTAACAGTGTTCCATCTTTACCTAATTTCCACCAACCAGACAACTTATGAGAATTTCCGGTACCGCTATGATAAGAAGGAAAACCCATACACAAAAGGAATAGTGGCAAACTTCAAAGAACTTTCTTGTTCCAAGATTCCAAGTCCACTGATCAATTTCAGAGAATGGGTTGCAGAAGAGGAGGATATTTTAGATGAATCCTTTACTTCAGATCTTGAAAAAGGTTTTATAAGCTCAAAACAAAAGTTTGACATGGACATGGGATTATATGGCAAGGATGGTATGCGAGTTCCGGGTATTTTACAGGATTTGGATTACAATGGCATTGAGGATCAACTGAAGAAAAAGGTAGGAGGAAAAGACGCTACATTTGAAATTTTTGTTCCTGTCGATCAAGATCAAAAATATGCTCAATGGAGATCTAAAGTTGGAGTCAATGTTCAAGAAGTAAAGACATAG 1239 0.3923 MNTSNNNLASSPSPSVAVSVEPSKTRRLYQVWKGNNKFLFGGRLVFGHDASSLFLTSFLIGGPAITFCIRMLLIMKEEDTLFNHLVLTGGVVLTILDFMFLFMTSGRDPGIIPRNSQLPDSDESCHTNTASMEWVNNRTPNLKLPRVKDVVVNGHTVKVKFCDTCLLYRPPRASHCSICNNCVQKFDHHCPWVGQCIGSRNYPFFILFISSSTLLCIYVFSVSWVTLLHQKGSLWSNMSRDVLSVTLIAYCFIAVWFVGGLTVFHLYLISTNQTTYENFRYRYDKKENPYTKGIVANFKELSCSKIPSPLINFREWVAEEEDILDESFTSDLEKGFISSKQKFDMDMGLYGKDGMRVPGILQDLDYNGIEDQLKKKVGGKDATFEIFVPVDQDQKYAQWRSKVGVNVQEVKT 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03016 412 Pfam DHHC palmitoyltransferase 159 280 IPR001594 GO:0016409
Trre13g03016 412 ProSiteProfiles DHHC domain profile. 160 210 - -
Trre13g03016 412 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 58 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03016 Trre-Chr13 31018806 31020887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03016 73 301 Lipid Metabolism Gene Families AT4G22750 27.660 3.65e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03016 - - mtr:11411488 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03016 13 31018806 31020887 Trre11g00891 11 7483650 7487483 PCT