Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02834 ATGGCACAAGAATCACAACAACAACAACAACAAGTGGATCCGCATAAGAATGAAGTTATTCGTTTAGAGCGTGAATCTGTTATTCCAATTCTCAAACCTAGACTCATCATGACATTGGCAAATCTTATTGAACATAGTTCCGACCGAGCTGAGTTTTTGAAGCTCTCAAAGAGGGTAGAGTACACTATTCGAGCTTGGTATCTTCTACAATTTGAGGACTTAATGCAACTCTACTCTCTCTTTGATCCTGTGCATGGGGCACAGAAGTTGCAACAGCAGAATCTAGCTCCTGATGAAGTTGATGTTCTTGAACAGAATTTTTTGACATACTTATTTCAGGTAATGGAAAAGAGCAACTTCAAGATAGTGACTGATGATGAGATTGAGGTTGCACATTCAGGCCAGTATCTTCTAAATCTTCCCATTTCTGTTGATGAATCTAAGCTTGACAAGACACTTTTGAAGAAATATTTTGAGCAGCATCATCATGATAACCTTCCAGATTTCTCTGATAAGTATGTTATCTTTCGGCGTGGCATTGGAATTGATCGAACAACCGATTACTTTGTCATGGAAAAAGTGGACATGCTCATTGGACGATTTTGGGCTTATCTGTTAAGAATAACTAGGTTGGGAAAGCTTTTATCAAGAAAGTCAAAGCCTAATAAGCAGGATTCAAGTGGCAATGAAATGATCCGTGAAGCAACTGGGGATGACTTTTATGTAGAACGGATACGTCTTGAAAACATGCAACTAAGCTCCCGTAATCTACTCGGCAAGACCTTGATCCAAGAACCAACATTTGATAGGATAATCGTAGTCTACAGGAGAGCCAGTACCAAATCTAAAAAAGAACGAGGAATATTCGTGAAGCATTTTAAAAACATTCCAATGGCTGATATGGAAATAGTTCTTCCAGAAAAGAAAAACCCTGGATTAACTCCAATGGATTGGGTCAAGTTTCTTATATCAGCAATTGTTGGACTGGTTGCTGTATTTAGTTCACTTGAAATGCCTTCGGCTGATTGGTGGGTCATATTTGCTGTTCTTTCCACAGTAGTTGGTTATATTGTCAAGACATATTTCACGTTCCAACAAAACTTGGCTCAATACCAAAATTTGATTACACAATCAATGTATGACAAACAACTGGACAGCGGAAAGGGTACACTTCTCCATTTATGTGATGATGTCATTCAGCAAGAAGTCAAAGAGGTGATTCTTTCATTCTTTATTCTAATGGAACAGGGTAAAGCTACAAGACAGGATCTCGATCACTGGTGTGAGGAACTAATCAAAGAAGAGTTTGGGGAGGAATGTGATTTTGATGTGGATGATGCAGTTAATAAATTAGAGAAATTGGGTATCGTCAGTCGGGATTCTATTGGTCGATATCAATGCGTTGGACTAAAACGGGCTAATGAGATCATTGGCACCACCACCGAAGAGCTTGTGCTCAAGGCAAGACAGGGAAACCTCACTACTTGA 1488 0.3918 MAQESQQQQQQVDPHKNEVIRLERESVIPILKPRLIMTLANLIEHSSDRAEFLKLSKRVEYTIRAWYLLQFEDLMQLYSLFDPVHGAQKLQQQNLAPDEVDVLEQNFLTYLFQVMEKSNFKIVTDDEIEVAHSGQYLLNLPISVDESKLDKTLLKKYFEQHHHDNLPDFSDKYVIFRRGIGIDRTTDYFVMEKVDMLIGRFWAYLLRITRLGKLLSRKSKPNKQDSSGNEMIREATGDDFYVERIRLENMQLSSRNLLGKTLIQEPTFDRIIVVYRRASTKSKKERGIFVKHFKNIPMADMEIVLPEKKNPGLTPMDWVKFLISAIVGLVAVFSSLEMPSADWWVIFAVLSTVVGYIVKTYFTFQQNLAQYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVILSFFILMEQGKATRQDLDHWCEELIKEEFGEECDFDVDDAVNKLEKLGIVSRDSIGRYQCVGLKRANEIIGTTTEELVLKARQGNLTT 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02834 495 PANTHER AMINOPEPTIDASE (DUF3754) 8 493 - -
Trre13g02834 495 Pfam Protein of unknown function (DUF3754) 268 389 IPR022227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02834 Trre-Chr13 27556053 27562329 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02834 - - gmx:100819645 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02834 13 27556053 27562329 Trre13g02834 13 27556053 27562329 ECH
Trre13g02834 13 27556053 27562329 Trre11g00879 11 7368776 7375595 PCT