Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00879 ATGGAACATTCAAGTTTTGAAGAAGCTGCCAAAAAAAGTTTGGAAGATAAAAAGAAAGAAGTGATTCGAATAGAACGTGAATCCGTCATACCAATTTTGAAACCTAAGCTCTTCATGACATTGGCTAATCTTATTAAGCATAGTTCTGATCGAGCAGAGTTTTTGAAGCTTTGCAAGAGAATAGAGTATACAATTAGAGCTTGGTACCTTCTACAGTTTGAGGATATGATGCAACTGTATTCACTCTTTGATCCTGTTTCTGGGGCCCAAAAGTTGGATCAACAAGGCTTAACTTCTCATGAAATTGATGTACTTGAACAAAACTTCCTGAGATACCTTTTTGAGGTCATGAAAAAGAGCAACTTCAAGATTGCAACTGACAATGAAATTAATGTTGCACTTTCTGGACAATATCTTCTAAATCTTCCCATTACTGTTGATGAATCTAAGCTTGACAATATGCTTTTGAAAAAATATTTTGAAGCACATCCCTTTAATAACCTTCCAGATTTCTATGACAAGTATATCATATTTCGGCGCGGCATTGGCATTGATCGAACGACGGATTACTTTATAATGGAGAAAGTAGACATGCTCATTGCTCGTTTCTGGGCATATCTATTAAAAACACTCAGGTTGGAAAAATTGATTACCAAACGATCAAAAAGACATGGTAAGAAGTTAAATCCAAAGAAAGACGATGAAATAAAGTCGGAAGATTGTCAAGATGATGTATACGAACGGATACGTCTTGAAAATATGCCATTGAGTTCTGGTACTTTGCTAAGCAAGACCTTAATTCAAGAACCTACATTTGATAGGATCATTGTTGTTTACAGGCGAGCCAGTTCCAATTCAAAACAAGAAAGAGGAATTTTTGTGAAGCATTTCAGAAACATCCCAATGGCTGATATGGAAATAGTTCTTCCAGAAAAGAAAAATCCTGGATTGACACCAATGGATTGGGTGAAGTTTCTTGGAACTGCTATTGTTGGGTTGGTAGCTGTTGTTAGTTCCCTTCAAGCAGCAACAACTGATTTGAGGGTTATTGGTGCTTTTCTCTCTACAATAGTTGGTTATTGTGTTAAAACATATTTCACGTTTCAACAAAACTTGGCTGCATATCAAAATATGATAACACAGTCAATGTATGACAAACAACTAGACAGTGGAAAGGGTACACTTCTTCATTTATGTGATGATGTCATTCAACAAGAAGTTAAAGAGGTAATGATTTCATTCTTTATTCTAATGGAACAGGGAAAATCTACAAGACAGGAACTGGATCAAGGGTGTGAAGAATTAATCAGAGAAGAGTTCAATGAGACATGCAATTTTGATGTAGATGATGCTGTTCACAAACTTGAGAAGTTAGGAATTGTCACTCGGGATCCTATAGGACGATATCAATGTGTTGGATTGAAAAGGGCTAATGAGATAATTGGTGTTACGACAGAAGAGCTTGTAATTAAGGCAAAACTAGGAAACACCAGTCCTTGA 1500 0.3613 MEHSSFEEAAKKSLEDKKKEVIRIERESVIPILKPKLFMTLANLIKHSSDRAEFLKLCKRIEYTIRAWYLLQFEDMMQLYSLFDPVSGAQKLDQQGLTSHEIDVLEQNFLRYLFEVMKKSNFKIATDNEINVALSGQYLLNLPITVDESKLDNMLLKKYFEAHPFNNLPDFYDKYIIFRRGIGIDRTTDYFIMEKVDMLIARFWAYLLKTLRLEKLITKRSKRHGKKLNPKKDDEIKSEDCQDDVYERIRLENMPLSSGTLLSKTLIQEPTFDRIIVVYRRASSNSKQERGIFVKHFRNIPMADMEIVLPEKKNPGLTPMDWVKFLGTAIVGLVAVVSSLQAATTDLRVIGAFLSTIVGYCVKTYFTFQQNLAAYQNMITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFFILMEQGKSTRQELDQGCEELIREEFNETCNFDVDDAVHKLEKLGIVTRDPIGRYQCVGLKRANEIIGVTTEELVIKAKLGNTSP 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00879 499 Coils Coil 7 27 - -
Trre11g00879 499 Pfam Protein of unknown function (DUF3754) 272 393 IPR022227 -
Trre11g00879 499 PANTHER AMINOPEPTIDASE (DUF3754) 10 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00879 Trre-Chr11 7368776 7375595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00879 - - tpra:123908934 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02834 13 27556053 27562329 Trre11g00879 11 7368776 7375595 PCT