Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01410 ATGGTTGACACAAAGTTGAATTTCAAAGACCAAAGATGGTCACTTCATGGAATGACTGCTCTTGTGACCGGGGGAACCCGAGGCATAGGACACGCAATTGTGGAAGAGTTGGCAGAATTTGGGGCAGCTGTGCATATATGTGCACGTAATGAAGATGATATTCAAAAATGTTTGGAAGAGTGGAAAAGTAAGGGGTTTAATGTAACAGGATCGGTATGTGATGTATTATACCGTGATCAACGTGAAAAATTAATGGAAATGGTTGATTCAATCTTTAATGGAAAACTCAACATTCTAGTAAATAATGCCGGGACAATTACAGTTAAGACAGCCCTAGAGTATACAGCTGAAGATATGAAAACTATAATGGCTTCTAAAGGAGCCATAAATCAATGCACCAAAAACTTAGCATTGGAATGGGCAAAGGATAATATTCGTGCTAATGTCGTCGTACCCGGAGCCGTAAATACTGCGATGTTGGAGTTTATTTTGAAACATCCAGGAGCTGATAAGGTCATGAATGATGCACTATCTCGTACACCTATTAGTCGTGTGGGTGAACCTAAAGACATATCAGGATTGATTGCTTTTCTTTGTCTTCCAGCTGCTTCATATATCACTGGACAAATTATAGCTGCAGATGGCGGTTTCACTAATTAA 660 0.3955 MVDTKLNFKDQRWSLHGMTALVTGGTRGIGHAIVEELAEFGAAVHICARNEDDIQKCLEEWKSKGFNVTGSVCDVLYRDQREKLMEMVDSIFNGKLNILVNNAGTITVKTALEYTAEDMKTIMASKGAINQCTKNLALEWAKDNIRANVVVPGAVNTAMLEFILKHPGADKVMNDALSRTPISRVGEPKDISGLIAFLCLPAASYITGQIIAADGGFTN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01410 219 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Trre13g01410 219 PRINTS Glucose/ribitol dehydrogenase family signature 143 160 IPR002347 -
Trre13g01410 219 PRINTS Glucose/ribitol dehydrogenase family signature 181 201 IPR002347 -
Trre13g01410 219 PRINTS Glucose/ribitol dehydrogenase family signature 122 141 IPR002347 -
Trre13g01410 219 Gene3D - 2 123 - -
Trre13g01410 219 Pfam Enoyl-(Acyl carrier protein) reductase 120 218 - -
Trre13g01410 219 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 218 IPR036291 -
Trre13g01410 219 Gene3D - 124 219 - -
Trre13g01410 219 PANTHER TROPINONE REDUCTASE 11 124 IPR045000 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01410 Trre-Chr13 11415626 11424315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01410 10 218 Miscellaneous Gene Families AT2G29290 47.638 1.80e-79 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01410 K08081 - gmx:100786456 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01410 13 11415626 11424315 Trre13g01410 13 11415626 11424315 ECH
Trre5g01939 5 14429472 14432026 Trre13g01410 13 11415626 11424315 ECH