Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04652 ATGACTAGTTTTATAGTGATTTTTGACTTTGACTCAACAATCATTGAATGTGACAGTGATAATTGGGTTCTTGATGAGTTTGGCTTAACTGAAAAATTCTATCAACTTCTTCCTAACATGCTTTGGAATCCTCTCATGGGCAAGATGATGAATGAACTTCATTCACAAGGAAAAAAAATTGAAGAAATTGTAGAAGTACTTAATAGGACTCCAATTCATCCACGTATTGTCCCTGCCATTGAGGCTGCTTATTCCCTTGGGTGTGAGCTAAGGATTGTGAGTGATGCAAATAGTTTCTTTATTGAAACAATTTTGAAGCATCATGGGGTGCTGAATTGTTTCTCAAAGATCACTGCAAACCCAAGTTATGTCAATGAAGAAGGGAGGCTCATAATTTGTCCGTACCATGATTATCTAAAATCTTCTCATGGATGTAACCTTTGTCCTCCAAATATGTGCAAGGGATTAGTGATGGAAAGGTTACAAAATTCACTTGACGAAGAAGGAAAGAAGAAAATTATTTACTTAGGAGATGGAAATGGTGATTTTTGTCCTAGTCTAAAGCTCAAAGAGAGTGATTATTTGATGCCTAGAATGAACTTTCCATTGTGTGATTTAGTATCTAAAAATTCTAATGACATAAAGGCACATGTACATGACTGGATGGATGGGGAAGAGCTTGAAAATGTTTTGCTTCATATCCTCAACAAAGCTAATATTGGTAAAGAAAACAATATTGTTGGTCCAAAAATAATCTCAATTGATTGCAAGTTGGGGACAATTTCAATTGATGCTCATAAGGTTTTCCCCGAAGCCATCGCAGTTCCTCTTTAA 834 0.3573 MTSFIVIFDFDSTIIECDSDNWVLDEFGLTEKFYQLLPNMLWNPLMGKMMNELHSQGKKIEEIVEVLNRTPIHPRIVPAIEAAYSLGCELRIVSDANSFFIETILKHHGVLNCFSKITANPSYVNEEGRLIICPYHDYLKSSHGCNLCPPNMCKGLVMERLQNSLDEEGKKKIIYLGDGNGDFCPSLKLKESDYLMPRMNFPLCDLVSKNSNDIKAHVHDWMDGEELENVLLHILNKANIGKENNIVGPKIISIDCKLGTISIDAHKVFPEAIAVPL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04652 277 Gene3D - 2 192 IPR023214 -
Trre11g04652 277 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 239 IPR016965 GO:0016791
Trre11g04652 277 NCBIfam HAD-IB family phosphatase 6 187 - -
Trre11g04652 277 NCBIfam MtnX-like HAD-IB family phosphatase 4 198 IPR006384 GO:0016791
Trre11g04652 277 SUPERFAMILY HAD-like 4 185 IPR036412 -
Trre11g04652 277 Pfam Putative Phosphatase 5 234 IPR016965 GO:0016791
Trre11g04652 277 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04652 Trre-Chr11 58171509 58173482 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04652 K13248 - gmx:100789743 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04652 11 58171509 58173482 Trre15g00562 15 3983802 3985020 PCT