Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03995 ATGGTCAACACTGAGCCTCCAACGCGTCAAGAGGGAAAATATGCTGCAATAGTGGTATGTTTTCTTCTTGGCAATGGATGTCTTTTCTCCTGGAACAGTATGCTCACAATAGAAGATTACTACATTTATTTGTTTCCAAAATATCATCCCTCAAGGGTGCTTACACTTGTATATCAGCCATTTGCAGTTGGGACACTTGCTATATTGGCTTATAATGAGGCAAAAGTTAATACAAGATTAAGGAATTTGTTTGGATATACTCTATTTTTCATAACCACTTTCTTGGTGTTAGTAATTAATTTAGCAACATCTGGTAAAGGAGGAATTGGAACTTTTATTGGTATATGTGCAATTAGTGGTGCTTTTGGAGTTGCTGATGCTCATGTTCAAGGTGGAATGATTGGAGACTTGTCCTACATGCAACCGGAATTCGTTCAGTCCTTCCTTTGTGGTTTGGCGGCATCTGGTGCATTAACCTCTGGTTTAAGGTTAATTACAAAAGCAGCATTTGATAATTCTAAGAATGGTCTTAGAAAAGGAGCTATTCTATTTTTTTCTATATCAACATTCTTTGAGCTTCTATGTGTTCTTCTCTATGCATTTGTTTTTCCTAAAATACCAATTGTGAAGTACTACCGTTCAATAGCTGCATCAGAAGGATGCAAAACTGTTTCAGCTGATCTTGCAGCTGGTGGAATCCAAACAATACCTAAAGGAGAAGAGGATTTTGCACAAAAACAAGAGAGGAAAGGAAATAAGCAATTGTTTTTTGAAAACATTGATTATTTACTTGATATGTTCCTAATATATGCATTGACACTGTCTATTTTCCCTGGATTCCTTTCTGAAGACACTGGAACACATAGTTTAGGAACCTGGTATGCACTTGTGTTAATTGCAATGTATAATGTGTGGGATCTAATAGGAAGATACATCCCACTCTTGGATTTCTTGAAATTGGAGTCAAGAAAATTGATCACGGTCGTAATTCTATGTCGTTTCTTACTTGTTCCGGCTTTTTATTTCACCGCAAAGTATGGTGATCAGGGTTGGATGATACTGTTGACATCATTCTTAGGGCTATCGAATGGTTACCTCACTGTTTGCGTTATGACATCTGCACCCAAAGGATATAAGGGGCCAGAACAAAATGCATTGGGAAACCTCTTGGTGTTGTTTCTACTTGGAGGTATTTTTGCAGGGGTGACATTAGACTGGTTATGGTTGATAGGTAAAGGTTGGTGA 1245 0.3767 MVNTEPPTRQEGKYAAIVVCFLLGNGCLFSWNSMLTIEDYYIYLFPKYHPSRVLTLVYQPFAVGTLAILAYNEAKVNTRLRNLFGYTLFFITTFLVLVINLATSGKGGIGTFIGICAISGAFGVADAHVQGGMIGDLSYMQPEFVQSFLCGLAASGALTSGLRLITKAAFDNSKNGLRKGAILFFSISTFFELLCVLLYAFVFPKIPIVKYYRSIAASEGCKTVSADLAAGGIQTIPKGEEDFAQKQERKGNKQLFFENIDYLLDMFLIYALTLSIFPGFLSEDTGTHSLGTWYALVLIAMYNVWDLIGRYIPLLDFLKLESRKLITVVILCRFLLVPAFYFTAKYGDQGWMILLTSFLGLSNGYLTVCVMTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03995 414 PIRSF ENT 3 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
Trre11g03995 414 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 5 408 IPR002259 GO:0005337|GO:0016020|GO:1901642
Trre11g03995 414 Pfam Nucleoside transporter 123 408 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03995 Trre-Chr11 53182675 53185194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03995 3 412 Organic Solute Cotransporters AT4G05120 69.756 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03995 K15014 - gmx:100798899 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03995 11 53182675 53185194 Trre11g03995 11 53182675 53185194 ECH
Trre11g03995 11 53182675 53185194 Trre7g01238 7 8761607 8764708 PCT