Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03738 ATGAATGTATCAAACATAATTTCTTGTTTTAGTGAAAATGCAATAAATGTGTCACATTCTTCATCATGTTCAAGCTATTCAATTTCAAACAAATCTTGTATATCTCAAAATATCACACCTTCAACACAAAACTCAGTCTCATCAATCTACAAAACAATCCTCTCCAACAAAAAACAAATTTTCATCACAATCACATGGTCTAAAAGTCAATCAAATCAAGGGCTCACAATAATCTTCAATGAAGAAGATCCACTAGCTTCAAGAACATTCACACTCAACACAAATTCAAAGCTTTTTAGAAAGAAAAGAGGAAGCAAATTTATGGAAATGGAACATTTTCATGATTCAAAAGTTGAAATCTTTTGGGATCTTTCAAATGCAAGATATGAAACTAGTCCTGAACCTATTGATGGATTTTATGTTGCAATTTTAGTAGATTCAGAAATTGGTCTTATTTTAGGTGACAATATAAGTGAAGAAAATTTAACAAAGAAGCTGAAAAAAAAAGCCCTTTTGGCTAAAGTTTCACTTTTTTCAAGAAGTGAATATTTTTCAGGTAACACACTTTATTTTTCAACTAAGGCTAAGTTTTGTGAGAGTGGAAATTTGCATGATATTTTGATTAAATGTAGTGATGAAAATGAAGGGTTTAATTATAAATCACATGTTTTGAATGTTTTTATTGATAAGAAGATTGTGATTAGTGTGAAGAGGTTGAAGTGGAATTTTAGGGGGAATCAAACAATTTTTGTTGATGGGTTATTGGTGGATTTGTTATGGGATGTTCATAATTGGTTTTTTAAAGGTGTTTATGGTAATGCTGTGTTTATGTTTAGGACTAGGAGTGGTTTGGATAGTAGATTATGGTTAGAGGAGAAAGTGGAAGTTAAAGATAAAGAAAGTGTTGAATTTTCCTTGTTGATTTATGCTTGTAAAATCACTTAA 945 0.3005 MNVSNIISCFSENAINVSHSSSCSSYSISNKSCISQNITPSTQNSVSSIYKTILSNKKQIFITITWSKSQSNQGLTIIFNEEDPLASRTFTLNTNSKLFRKKRGSKFMEMEHFHDSKVEIFWDLSNARYETSPEPIDGFYVAILVDSEIGLILGDNISEENLTKKLKKKALLAKVSLFSRSEYFSGNTLYFSTKAKFCESGNLHDILIKCSDENEGFNYKSHVLNVFIDKKIVISVKRLKWNFRGNQTIFVDGLLVDLLWDVHNWFFKGVYGNAVFMFRTRSGLDSRLWLEEKVEVKDKESVEFSLLIYACKIT 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03738 314 PANTHER EXPRESSED PROTEIN 6 312 IPR008586 -
Trre11g03738 314 Pfam Plant protein of unknown function (DUF868) 41 312 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03738 Trre-Chr11 50696092 50697036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03738 8 312 EF-hand Containing Proteins AT5G28150 35.390 8.57e-50 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03738 - - gmx:100798692 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03738 11 50696092 50697036 Trre11g03738 11 50696092 50697036 ECH
Trre11g03738 11 50696092 50697036 Trre7g01478 7 10919218 10920156 PCT