Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01578 ATGAGTAACGTCACAGAAAAATTGGGCATCAAGATTGAGAGAAACCCTTCTGAGGAAAAACTCACTCAACTTGGTGTTAGGCAATGGTCCAAATGGAGTTGTTCTCCAAGCAAATTCCCATGGACTTATGATTCCAAAGAAACATGTTATCTTCTAGAAGGAAAAGTTAAGGTAACACCAAGTGGAGGAAATGAGTCAGTTGAATTTGGTGCTGGTGACTTGGTTGTGTTTCCTAAAGGGATGAGTTGTACTTGGGATGTATCTGTTGCTGTGAACAAGCATTATCTCTTTGAATAA 297 0.3939 MSNVTEKLGIKIERNPSEEKLTQLGVRQWSKWSCSPSKFPWTYDSKETCYLLEGKVKVTPSGGNESVEFGAGDLVVFPKGMSCTWDVSVAVNKHYLFE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01578 98 PANTHER OS04G0445200 PROTEIN 2 98 - -
Trre11g01578 98 Pfam EutQ-like cupin domain 22 95 IPR008579 -
Trre11g01578 98 Gene3D Jelly Rolls 1 97 IPR014710 -
Trre11g01578 98 CDD cupin_TM1112-like 29 97 - -
Trre11g01578 98 SUPERFAMILY RmlC-like cupins 21 96 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01578 Trre-Chr11 15427474 15429837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01578 K06995 - gmx:100527331 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01578 11 15427474 15429837 Trre11g01578 11 15427474 15429837 ECH
Trre11g01578 11 15427474 15429837 Trre1g03486 1 31329927 31330820 PCT