Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5026 ATGGAGTTGCCGAATTCAGAAATACAACCCAATAAGCGTAGGAGAAAGAAATCTTCTGTATGGGAACACTTCACTTTGGAAAAAACTGATGAACCAGGATGTATTAGGGCTTGCTGTAATAGGTGCAAAAAATCGTTTGCCTATTTGAAAGGTTCTAAACAATCTGGCACCAGCCATCTCAATAGGCACATTACTCTGGGAATATGTATGAGAAATCAGCAAACCAAGTGTTCCAAAACTAGTGCCGAACCACATAAGAAGCCAGCTAGAGAAAAACCTTACTTTACTTCTATGTCATTTGATCAGGGGCATTGCAACGATAAGATTGCCAAAATGATTATTTTACATGATTATCCACTTCATATGGTGGAACACAAAGGTTTCATTGATTTTGCGCGGGCACTTCAACCACAGTTCAACCCACTGAGCTTAAATACTATCCAAGGGGATTGTGTTTCCATTTACCTCAGAGAGAAGCAAAACCTTCTGAATCTTATTGACGGGATTCCTGGACGAGTCAACCTCACCTTGGACTTATGGACTACAAATCAGACATCGGGCTATGTTTTTCTTCGTGGGCACTTCATCGATGGTGATTGGAACTTACATCATCCCATTCTTAATGTTTTTGCGGTGCCATTTCCTGATTTGGATGGTTCTTTAAATCAAACTATAGTGACGTGCCTAAAGAATTGGCATTTAAAGGATCGCCTGTTTGCCGTTCTATTTCATAAACTCTTTTTCAGTGAGACTTTGATGGAAAATATGAGGGATCTTCTCTCTTTTAAGAACCCTGTGATCCTCAACGGTGAATTATTAAGACAAAATTGTTATGCTCGCGTGCTTAGTGGCCTTGCATTAGATGCTCTCTGGTCAATGCAAGAAACTATTACTAAAGTTCGCAAGAGTGTGCAATATGTGAAATCTTCAAAATCGATTGAAGAGAGATTTTGGCAACTTAAGCAACAACTTGGAGTTCCTAGTAAGATGGATCTCTTAATTGATGACAAAAATAAATGGGACACAGTCTACCATATGCTTGTCGCTGCCGGTGAATTAAAGGAAGTTTTTACTTGTTTTGAGGCTTTTGATCCCGATTACAGAATTTCCCTTACAATGGATGATTGGAAGCAGGTTGAAAATCTATGTGTGTGTTTGAAGTTTTTGTATGATGCTGCTATATTTTTAACCATCCAACCGTACCCAACTGCAAACTTATTTTTCCTCGAAGTATCCAAGCTTAAGGTGAAGTTGACTGAGGCGATCCAGGATCCTTTCTGTTGTAGTATGATTACATCTCTGCAACAGAATTTTGATCGGTATTGGAGCGAAAGCTGCTTCATCTTAGCAATTGCTGTAGCCATGGATCCGAGGTACAAAATGAAACTTGTGGAATCCACTTTTGCTCAGATATTTGGCGAGAATGCTGATCCATTAAGAACGGTTGAGGATAGTCTTCATGAAATGTTCCTCGAATATAGTATCATACAAGTGCTTCCTTTTACCGAAACAAATTTTGATGTCGGGAACGACATTATGATGAAAACTGATGAATTTCAAGATGTATCATTTGATGGATCTCTTTTTCCTGCCGAAGATGGACTTTCCGATATTGAGTTCTATATTTCCGACTTCACTAAGTCAGAATTGAGTGAGTATCTTGAAGAGCCTCTAGAGCCTAGTGTACAAGAATTTGATATTCTAGGCTGGTGGAGAATTAATGGATCCAAGTATCCAACATTGTGCAGAATGGCATCTGATATTTTGTCTATGCCAGTATCCACTCTCTCTGCAGATTCTATTTTTGACACACAAATTAGAAAAATGGACAACAACAGGAGTTCATTAGACTCTCTGACTCTTGAGGCACTAATATGTACTAAGGATTGGTTCCATTGTGAATCAAAACCCATTGATGTTGTTTCACATGAACTTGTGAAAATTGAGTATTAG 1953 0.3871 MELPNSEIQPNKRRRKKSSVWEHFTLEKTDEPGCIRACCNRCKKSFAYLKGSKQSGTSHLNRHITLGICMRNQQTKCSKTSAEPHKKPAREKPYFTSMSFDQGHCNDKIAKMIILHDYPLHMVEHKGFIDFARALQPQFNPLSLNTIQGDCVSIYLREKQNLLNLIDGIPGRVNLTLDLWTTNQTSGYVFLRGHFIDGDWNLHHPILNVFAVPFPDLDGSLNQTIVTCLKNWHLKDRLFAVLFHKLFFSETLMENMRDLLSFKNPVILNGELLRQNCYARVLSGLALDALWSMQETITKVRKSVQYVKSSKSIEERFWQLKQQLGVPSKMDLLIDDKNKWDTVYHMLVAAGELKEVFTCFEAFDPDYRISLTMDDWKQVENLCVCLKFLYDAAIFLTIQPYPTANLFFLEVSKLKVKLTEAIQDPFCCSMITSLQQNFDRYWSESCFILAIAVAMDPRYKMKLVESTFAQIFGENADPLRTVEDSLHEMFLEYSIIQVLPFTETNFDVGNDIMMKTDEFQDVSFDGSLFPAEDGLSDIEFYISDFTKSELSEYLEEPLEPSVQEFDILGWWRINGSKYPTLCRMASDILSMPVSTLSADSIFDTQIRKMDNNRSSLDSLTLEALICTKDWFHCESKPIDVVSHELVKIEY* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5026 650 Pfam Domain of unknown function (DUF4413) 400 493 IPR025525 GO:0003677
Tpr7g5026 650 SUPERFAMILY Ribonuclease H-like 166 632 IPR012337 -
Tpr7g5026 650 ProSiteProfiles Zinc finger BED-type profile. 15 92 IPR003656 GO:0003677
Tpr7g5026 650 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 5 638 - -
Tpr7g5026 650 SUPERFAMILY beta-beta-alpha zinc fingers 18 66 IPR036236 -
Tpr7g5026 650 PANTHER BED FINGER-RELATED 5 638 IPR045259 -
Tpr7g5026 650 SMART bed5 15 72 - -
Tpr7g5026 650 Pfam hAT family C-terminal dimerisation region 549 631 IPR008906 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5026 Tpr-Chr7 57866945 57870370 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5026 - - gmx:106796308 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g5026 7 57866945 57870370 Tpr7g5026 7 57866945 57870370 ECH
Tpr7g5026 7 57866945 57870370 Tpr4g0522 4 4966500 4970407 PCT