Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5021 ATGTCTGCTGCGGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGACCTTCCTCCATCACCACCTGTTTCTTCTAAGAGGCTTCGTTGTTCTTCTTCACCAATTCGTCTTTCTCTTCCATCTCTTATTGATCATCTTCAATCTCTTTTTCCACATATGGAAGATCAGATTATTGAAAGAGCGTTGCAGGAATGTGGTAATGATTTAGATGCTGCTATTAAGAGCTTGCACGGGCTTTGTTTAGGATCTGCTGATGAAAATTCTGTAGTTGCTCCTAATTCGGATGCTGCTGTCGAAACAGGTGTATTTGAAGGTAATGGGGATGCTTCTGCATCTGGGAATCAGGCAGCTGAAAACAATCTTCCAGCCGATGGACCTGAATGGATTGACTTGTTTGTTAGGGAAATGTCGTGTGCTACTAGTGTTGATGATGCAAGAGCCCGTGCTGCTAAATTGCTTGAGGTTTTGGAGAAATCGATCAGCTCGAATGTGAGTTCTGGGGCAATGACTGATCTTCAAAGGGAAAATTTGATGTTGAAATATCAAGTTGAAGTCTTGACCAAGGAAAGAAATTGTTTCAAAAGTGCTTTTAGAATCCAGCTTGAACGCCTTTCTGATTATGAGGATAAAGACCGAGAGTTGCAGCAGTTGAAGCAGTTGGTGTCTCAATACCAGGAACAGATCAGAACTCTTGAGGTTAACAACTATGCTTTGCGAATGCATCTGAATCAGGCACAAAAATACAACCCTTTTCCTGGGGGTTTCCCACCTGATGCCTTCTAA 780 0.4256 MSAAVCGSKRSFFEDLPPSPPVSSKRLRCSSSPIRLSLPSLIDHLQSLFPHMEDQIIERALQECGNDLDAAIKSLHGLCLGSADENSVVAPNSDAAVETGVFEGNGDASASGNQAAENNLPADGPEWIDLFVREMSCATSVDDARARAAKLLEVLEKSISSNVSSGAMTDLQRENLMLKYQVEVLTKERNCFKSAFRIQLERLSDYEDKDRELQQLKQLVSQYQEQIRTLEVNNYALRMHLNQAQKYNPFPGGFPPDAF* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5021 259 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 259 - -
Tpr7g5021 259 CDD CUE 40 75 - -
Tpr7g5021 259 Gene3D - 39 80 - -
Tpr7g5021 259 SUPERFAMILY UBA-like 38 82 IPR009060 GO:0005515
Tpr7g5021 259 ProSiteProfiles CUE domain profile. 37 83 IPR003892 GO:0043130
Tpr7g5021 259 Pfam CUE domain 40 74 IPR003892 GO:0043130
Tpr7g5021 259 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 259 - -
Tpr7g5021 259 Coils Coil 206 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5021 Tpr-Chr7 57830989 57833941 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5021 - - gmx:100815998 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g5021 7 57830989 57833941 Tpr7g5021 7 57830989 57833941 ECH
Tpr7g5021 7 57830989 57833941 Tpr4g0524 4 4982737 4988524 PCT