Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0524 ATGTCTGCTGCTGTGTGCGGAAGCAAAAGATCTTTCTTTGAAGAACTTCCACCTTCTCCGCCACTTTCTAAGAGGCTTCGTTGTTCATCTGCTACTTCTCCGATTCGTTTTCCGACTCCATCTCTTATTGATCAGCTCACAAATCTCTTCCCTCATATGGACCAATTGATTCTTGAAAGAGCTCTCCAAGAATGTGACAATGACCTAGATGCAGCCATCAAGAGCCTGAATGAGCTTTATTTGGGAGCTGCCGGGGGAAATTTTGGAGCTGCTGAAGAATCGGAGATTGATGTTAATGTGGATGCAGGTAAATTGCAAAATGATGGCAATGCCTCTGCTTCTGAGAACCAGTCTACTTTGAGCAGCCTTCCTGCAGATGGAGCTGAATGGATTGATTTTTTTGTTCGAGAAATGATGGTTGCTACCAGTGTTGATGATGCTAGAGCCCGTGCTGCTAGAATGCTGGAGGTTCTAGAGAAATCAATCAATGAGCGGGCAAGTGCTGAGAAAACAGATGTTCTTCAGAAGGAGAATTCAATGCTGAAGGGGCAAATCGAAGTGCTGAGTAAGGAGAGAAACTCTTTCAAAAACGCATTTAGGATCCAGAACGAACGTCTTGCTGATTATGAGAATAAGAATCAAGAATTGCAGCATTTGAAGCAGTTGGCCTCTCAATACCAGGAGCAGATCAGAACACTTGAGATCAACAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGGGCAACGGATTTCAAGGGCATTTCCCACCTGATATCTTCTAA 789 0.4398 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSATSPIRFPTPSLIDQLTNLFPHMDQLILERALQECDNDLDAAIKSLNELYLGAAGGNFGAAEESEIDVNVDAGKLQNDGNASASENQSTLSSLPADGAEWIDFFVREMMVATSVDDARARAARMLEVLEKSINERASAEKTDVLQKENSMLKGQIEVLSKERNSFKNAFRIQNERLADYENKNQELQHLKQLASQYQEQIRTLEINNYALAMHLKQAQQGNGFQGHFPPDIF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0524 262 Gene3D - 38 82 - -
Tpr4g0524 262 ProSiteProfiles CUE domain profile. 38 81 IPR003892 GO:0043130
Tpr4g0524 262 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 262 - -
Tpr4g0524 262 Coils Coil 144 164 - -
Tpr4g0524 262 Coils Coil 199 236 - -
Tpr4g0524 262 CDD CUE 41 76 - -
Tpr4g0524 262 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 262 - -
Tpr4g0524 262 SUPERFAMILY UBA-like 40 83 IPR009060 GO:0005515
Tpr4g0524 262 Pfam CUE domain 40 78 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0524 Tpr-Chr4 4982737 4988524 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0524 - - gmx:100813137 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0524 4 4982737 4988524 Tpr4g0524 4 4982737 4988524 ECH
Tpr7g5021 7 57830989 57833941 Tpr4g0524 4 4982737 4988524 PCT