Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4991 ATGGCAGCGGCGCGGCGGCTGCTATCACGTATGCGTGTGATTCCGTTACCGGCGGCGGTTGGCGCGGCGGATAGTGTCACGTTGGCCGGTGGCGCATATGCGTGTAATTGTAGGTGTAACAGCAAAATTCCAGCTTTGAATACAAAATATTCGAGGTTGAGTTCTTCGTCTATATCATCATCACTATGGCGGAGGAACAAAATAGATCAGAAATTGCCCTTGATTGTAAAAGCTGGAGACCCAGTTCTTCATGAACCTGCACTTGACATTGATCCAAATGAGATTAAATCAGAGAAGATTCAGAAGATAATCGATGAAATGATTCTTGTTATGAGAAAATCCCCTGGAGTTGGTCTTGCTGCTCCACAAATTGGAATCCCCTTAAGGATAATTGTTTTGGAGGATAAAGAAGAATATATTAGTTACAACACAGAGGAGGAGACCAAAGCACAAGACAGAAGACCTTTTGATCTTTTGGTGATTCTGAACCCCAAGCTAAAGAACAAGAGCAACAGGACTGCCTTCTTTTTTGAAGGGTGCTTGAGCGTTGATCGATTTCAAGCTGTGGTAGAGCGGTACCTTGATGTCGAGGTGTCAGGTTTTGATCGATATGGTGAGCCAATCAAAATAAATGCTTCTGGTTGGCAGGCTCGGATTTTACAGCATGAGTGTGATCACCTAGATGGAACACTATTTGTTGATAAGATGGTACCTAAAACTTTCAGATATTGGAGAAACATGGATCTGCCACTTGCTCATGGTTGCCCCAAACTTGGCCCCCGAGCTTAA 789 0.4411 MAAARRLLSRMRVIPLPAAVGAADSVTLAGGAYACNCRCNSKIPALNTKYSRLSSSSISSSLWRRNKIDQKLPLIVKAGDPVLHEPALDIDPNEIKSEKIQKIIDEMILVMRKSPGVGLAAPQIGIPLRIIVLEDKEEYISYNTEEETKAQDRRPFDLLVILNPKLKNKSNRTAFFFEGCLSVDRFQAVVERYLDVEVSGFDRYGEPIKINASGWQARILQHECDHLDGTLFVDKMVPKTFRYWRNMDLPLAHGCPKLGPRA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4991 262 PANTHER PEPTIDE DEFORMYLASE 35 261 IPR023635 GO:0042586
Tpr7g4991 262 SUPERFAMILY Peptide deformylase 74 245 IPR036821 -
Tpr7g4991 262 Hamap Peptide deformylase [def]. 71 247 IPR023635 GO:0042586
Tpr7g4991 262 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Tpr7g4991 262 Pfam Polypeptide deformylase 75 239 IPR023635 GO:0042586
Tpr7g4991 262 Gene3D Peptide deformylase 71 260 IPR036821 -
Tpr7g4991 262 PANTHER PEPTIDE DEFORMYLASE 35 261 - -
Tpr7g4991 262 TIGRFAM pept_deformyl: peptide deformylase 79 238 IPR023635 GO:0042586
Tpr7g4991 262 CDD Pep_deformylase 75 232 IPR023635 GO:0042586
Tpr7g4991 262 PRINTS Peptide deformylase signature 105 134 IPR023635 GO:0042586
Tpr7g4991 262 PRINTS Peptide deformylase signature 178 189 IPR023635 GO:0042586
Tpr7g4991 262 PRINTS Peptide deformylase signature 190 208 IPR023635 GO:0042586
Tpr7g4991 262 PRINTS Peptide deformylase signature 209 238 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4991 Tpr-Chr7 57624371 57626211 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4991 K01462 - zju:107408292 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4991 7 57624371 57626211 Tpr7g4991 7 57624371 57626211 ECH
Tpr7g4991 7 57624371 57626211 Tpr4g0555 4 5218256 5221764 PCT