Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0555 ATGAAAGCCATGGAAGCTTTACATATGCGGTGTGTACTTCCAGTATCCATGTCCAAAAACTCTCTCTTTACAACCAAAACTACAACCCCATTATCTGCATTACCAATTTCAAAGCCTCCATTGATTTTAACCTTAACACCATCATCATCATCTTCTCAAGCTGCTACTGTAAGAACAAGAGCAGGTTGGTTTTCAGGCCTTACAGATAATAAGAAGAAGATGAATTTGCCTGATACTGTTAAAGCTGGTGACCCAGTTCTTCATGAACCTGCTCAAGAAATTGATCCTAGTGAGATAAAATCTGAGAAAGTGCAGAAAATTATTGATGATATGATTAGGGTCATGAGGAAAGCTCCTGGTGTTGGTTTAGCTGCTCCACAAATTGGAATTCCTTCTAGGATAATTGTTTTGGAAGATACCAAAGAATATATTAGTTATGCCCCAAAGGAAGAGATCAAAGCTCAAGATAGACGACCTTTTGATCTTTTGGTGATCGTGAATCCCAAGCTGAAGAATAAGAGCAACAAGACTGCCCTATTTTTTGAAGGGTGTTTGAGTGTTGATGGATTTAGAGCTGTGGTGGAGCGATACCTTGACGTTGAAGTTACAGGTTTGGATCGTAATGGTGCACCAATCAAAATAACTGCTTCTGGTTGGCAAGCTCGGATTTTACAACATGAATGTGATCACTTGGATGGAACTCTATATGTTGATAAGATGGCACCTAGAACTTTCAGAACCGTAGACAACTTGGACCTGCCTCTTGCCCAAGGATGTCCCAAACTTGGCCCTCGATAA 798 0.4035 MKAMEALHMRCVLPVSMSKNSLFTTKTTTPLSALPISKPPLILTLTPSSSSSQAATVRTRAGWFSGLTDNKKKMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDRNGAPIKITASGWQARILQHECDHLDGTLYVDKMAPRTFRTVDNLDLPLAQGCPKLGPR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0555 265 CDD Pep_deformylase 80 236 IPR023635 GO:0042586
Tpr4g0555 265 Gene3D Peptide deformylase 74 264 IPR036821 -
Tpr4g0555 265 PANTHER PEPTIDE DEFORMYLASE 41 265 - -
Tpr4g0555 265 PRINTS Peptide deformylase signature 109 138 IPR023635 GO:0042586
Tpr4g0555 265 PRINTS Peptide deformylase signature 182 193 IPR023635 GO:0042586
Tpr4g0555 265 PRINTS Peptide deformylase signature 194 212 IPR023635 GO:0042586
Tpr4g0555 265 PRINTS Peptide deformylase signature 213 242 IPR023635 GO:0042586
Tpr4g0555 265 PANTHER PEPTIDE DEFORMYLASE 41 265 IPR023635 GO:0042586
Tpr4g0555 265 SUPERFAMILY Peptide deformylase 71 247 IPR036821 -
Tpr4g0555 265 Hamap Peptide deformylase [def]. 75 251 IPR023635 GO:0042586
Tpr4g0555 265 Pfam Polypeptide deformylase 80 243 IPR023635 GO:0042586
Tpr4g0555 265 TIGRFAM pept_deformyl: peptide deformylase 80 243 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0555 Tpr-Chr4 5218256 5221764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0555 K01462 - gmx:100784292 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0555 4 5218256 5221764 Tpr4g0555 4 5218256 5221764 ECH
Tpr7g4991 7 57624371 57626211 Tpr4g0555 4 5218256 5221764 PCT