Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4972 ATGTGGCGGAGACTCTTCTCTTCTCCTCATCTCAAAACCCTATCTCCTCTCTCTCATTCTCATCCCCGATCCGCCGTCGCTGGACTCCGATCCCTCAACCTCGCCCGTCACGTCGCCACACAATCAGCTGGTTCGATCAAAAAGACAGTGGAGGATGTAGTTCCAATTGCTACCGGTCATGAACGTGAGGAGATTCAGGCTGACCTTGAGGGAAGGAATATTCTTGAAATAGACCATCCAGAAGGTCCTTTTGGCACAAAGGAAACACCTGCTGTTGTTAAGTCTTTCTATGACAGAAGGATAGTCGGATGCCCGGGTGGTGAAGGCGGTAAGTGTTCCTTGTCTTTATTAATCTGTGTTCAAGCCTTTTCACAATCTGGTGATAAGTATTGGAAGAATTTGGTTTATGTTATTATTGGTGAATTTTTTTTTTCTTCCTTATTTCTGCAGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAACCCCATGAATGTCCAGTGTGTGCACAATATTTTGAGCTTCAAGTGGTGGGACCTGGTGGTGATCCTTACGGACACAATTGAATGGATGCAGCGATTTTCCTTCAGGAATAAATTTTCCAAAGAGATTGTTTTACACTCGTACCTTTCAAAATCAAATTACCCTAATTTATTTGGTTTTGATCGGTCTAGACCTTGCGGTTTTTCAACTTCAGAGAAAGTTTCTGTGATTATTTAG 729 0.4321 MWRRLFSSPHLKTLSPLSHSHPRSAVAGLRSLNLARHVATQSAGSIKKTVEDVVPIATGHEREEIQADLEGRNILEIDHPEGPFGTKETPAVVKSFYDRRIVGCPGGEGGKCSLSLLICVQAFSQSGDKYWKNLVYVIIGEFFFSSLFLQRMSMMLSGFGWRKANPMNVQCVHNILSFKWWDLVVILTDTIEWMQRFSFRNKFSKEIVLHSYLSKSNYPNLFGFDRSRPCGFSTSEKVSVII* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4972 242 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 45 143 IPR002124 GO:0005740|GO:0005751|GO:0006123
Tpr7g4972 242 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B 1 110 - -
Tpr7g4972 242 SUPERFAMILY Rubredoxin-like 46 110 - -
Tpr7g4972 242 Gene3D Cytochrome c oxidase, subunit Vb 46 124 IPR036972 GO:0005740|GO:0005751|GO:0006123
Tpr7g4972 242 Pfam Cytochrome c oxidase subunit Vb 54 116 IPR002124 GO:0005740|GO:0005751|GO:0006123
Tpr7g4972 242 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 110 IPR002124 GO:0005740|GO:0005751|GO:0006123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4972 Tpr-Chr7 57506365 57510131 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4972 K02265 - gmx:100527520 149.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0567 4 5296381 5302136 Tpr7g4972 7 57506365 57510131 ECH
Tpr7g4972 7 57506365 57510131 Tpr7g4972 7 57506365 57510131 ECH
Tpr7g4972 7 57506365 57510131 Tpr4g0567 4 5296381 5302136 PCT