Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4965 ATGAAGAAACAATGTTTCAAAGAATCAGAAACAAGTCCAAACCAACAAGTATCCTTGGAATATTGCTGTTGGTTTGAAGATGCATGCATTCTTGACATGGATTACTTTGTTAAGACTCTTTCAAACATCAAACAAAAAGGTGTTCATGCCGATTTAATTGGTTCCGTCATCACTCACTATGCTTCCAAATGGCTCCCTGACTTAGAAACTTCAAATGCAAATGCTAGTGCAAATTCACCTGAAAGTGTAACAACATCATGGATGAAGAAAAGGTTCTTTGTTGAAACTTTAGTCAGTGTTCTTCCACCAGACAAAGATTCAATTCCATGCAACTTCCTCCTTCGTCTTCTAAGAACAGCAAACATGGTTACTGTCGATTCTACTTATCGAACCGAGCTTGAGAACCGAATTTCATGGCAGTTAGATCAAGCTTCATTGAAAGAACTCATGATACCTTCTTTTAGTCATACTTGTGGGACCCTTTTGGATGTTGAGCTTATTATTAGATTGGTTAAGAGGTTTTTGAGTTTGGATCATGATGGATCTAAAAATGGTGCTGCTTTAGTTAAGGTTGCTAAGTTGGTTGATTGTTACCTTGCTGAGGTTGGTTTGGATGCTAATTTGAGTTTATCTCAATTTGCTGCACTTGCTGGTGCTCTTCCTAGTCATGCAAGAGCTACTGATGATGGTTTGTATAGAGCCATTGACACTTATCTTAAGGCACATCCAAGCGTGTCGAAGCAAGAAAGGAAGGGACTGTGTAGGTTGATTGATAGCAGGAAACTCACACCAGAAGCCTCACTTCATGCAGCTCAAAACGAACGGTTGCCGGTGAGAGCTGTTATACAGGTTCTCTTCTCTGAACAAACGAAACTCAACCGCCACATTGATTGGAGTGCTTCTTTCAGTAGTATGAGAAGTCCAAGTGGATATGGTGGTGTGCTCGACACGCCAGCACGGTGCCTTTCGAAGCGCGAAATGAACGTGCAGCAAATGGAGATAAAGAAACTGAAGGAAGATGTTTATAGGCTGCAAAGCCAGTGCAATGCCATGCAAGCACAGATGGAAAAGATGGCTGAGAAGAAGAAAGGTTTCTTCAAATGGAAGAAACTTTCTTTTCATAAAAGCAATGGAGAGATGGAGAATGTTGAACAGCAAGAAGCTGAAACTGAATTTGGGTTTGGAAGACAAACACCTACGGACATGAAAACTAGTACTGTGGCCAAAACTAGGACTCCTCAAAAGTGGAGGAAATCTCTATCCTGA 1266 0.4092 MKKQCFKESETSPNQQVSLEYCCWFEDACILDMDYFVKTLSNIKQKGVHADLIGSVITHYASKWLPDLETSNANASANSPESVTTSWMKKRFFVETLVSVLPPDKDSIPCNFLLRLLRTANMVTVDSTYRTELENRISWQLDQASLKELMIPSFSHTCGTLLDVELIIRLVKRFLSLDHDGSKNGAALVKVAKLVDCYLAEVGLDANLSLSQFAALAGALPSHARATDDGLYRAIDTYLKAHPSVSKQERKGLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHIDWSASFSSMRSPSGYGGVLDTPARCLSKREMNVQQMEIKKLKEDVYRLQSQCNAMQAQMEKMAEKKKGFFKWKKLSFHKSNGEMENVEQQEAETEFGFGRQTPTDMKTSTVAKTRTPQKWRKSLS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4965 421 Coils Coil 327 361 - -
Tpr7g4965 421 Pfam NPH3 family 23 267 IPR027356 -
Tpr7g4965 421 MobiDBLite consensus disorder prediction 391 421 - -
Tpr7g4965 421 MobiDBLite consensus disorder prediction 379 421 - -
Tpr7g4965 421 ProSiteProfiles NPH3 domain profile. 22 291 IPR027356 -
Tpr7g4965 421 PANTHER OS12G0117600 PROTEIN 18 421 IPR043454 -
Tpr7g4965 421 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 18 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4965 Tpr-Chr7 57443323 57445811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4965 24 357 EF-hand Containing Proteins AT3G44820 32.353 8.90e-54 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4965 - - gmx:100777820 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4965 7 57443323 57445811 Tpr7g4965 7 57443323 57445811 ECH
Tpr7g4965 7 57443323 57445811 Tpr4g0574 4 5386369 5389137 PCT