Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4954 ATGGGTGCTTCTCTTCCTCCTAAAGAGGCCAACCTCTTCAAACTCATTGTTAAATCCTATGAAACCAAACAGTACAAGAAGGGACTCAAAGCAGCCGATGCCATTTTGAAAAAGTTTCCAGATCATGGAGAAACTTTATCGATGAAGGGTTTGACATTAAATTGCATGGATCGTAAATCTGAAGCATACGAACTGGTTCGCCAAGGATTGAAGGTATGTTGCATTTGGTTTTGCACCATCCATCAATCTTTAATTTTTTTTTCATCTGATGCTCCAAGCTTAACTTTTGCTCTGCTGCAGAATGACCTTAAGAGTCATGTTTGCTGGCATGTTTATGGTCTTCTCTATCGGTCTGACAGAGAATACAGGGAAGCAATCAAGTGCTATCGAAATGCACTAAGGATAGATCCTGACAACATTGAAATCTTACGTGATCTATCTCTCTTACAGGCACAAATGCGAGATTTATCTGGCTTTGTTGAGACGCGGCAACAACTTCTGACTCTCAAGTCAAATCATCGCATGAACTGGATTGGATTTGCTGTTTCACATCATTTGAACTCTAATGCATCAAAAGCTATTGAAATTCTGGAAGCATATGAAGGGACATTAGAAGATGATTATCCTCCAGAAAATGAACGAATTGAGCATGGGGAAATGGTTTTATATAAGGTCTCTTTGTTAGAGGAATGTGGATTTTTTGAGAGAGCTTTTGAGGAGTTACAGAAGAAGGAGCCAAAAATTGTTGATAAGCTTGGATATAAAGAACAAGAGGTTTCACTTTTAGTCAAGCTTGGTCGCTTAGAAGAAGCCGAGAAATTGTACCAGACATTGCTTTCCATGAATCCCGATAATTACAAATATTATGAAGGCCTTCAACGATGTGTTGGGTTATATTCAGAAAATGGCGATTTTTCTCCCGATGAAATAGATCGGTTAGATACCTTGTACAAAACACTTCGGGAGCAATTTAAGTGGTCATCTGCTGTCAAGAGAATACCACTAGATTTTCTTCAAGGTGATAGATTTCGAGAAGCAGCAGATAATTATATTAGGCCTCTCCTAACTAAGGGAGTTCCATCTCTATTCTCAGATCTCTCTTCTTTATACAATCACCCTGGGAAGGCAGACATTTTGGAACAACTTATTCTTGAGTTAGAGAATTCTATTAGGACGACTGGTCAATACCCTGGGAGGGCAGAAAAAGAGCCCCCCTCAACTCTTATGTGGACTCTGTTCTTGTTGGCTCAGCATTATGACAGACGGGGCCAACATGAAATCGCACTTTCTAAAATCAATGAGGCTATAGAACACACTCCTACTGTCATTGATCTATACTCTGCCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGCTGCTGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGATCTTGGTGATCGTTATGTTAATAGTGAATGTGTGAAACGCATGCTGCAGGCTGATCAGATGGTTTTGGCAGAAAAAACTGCTGTGCTATTCACAAAAGATGGGGATCAACACAACAACCTCCATGACATGCAGTGCATGTGGTACGAGCTCGCCTCTGCTGAAAGCTGCTTCCGCCAAGGGGATCTTGGACTATCTCTCAAAAAATTCTTAGCAGTGGAGAAGCATTATGCAGATATTACTGAAGACCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACATTGCGTACTTATGTGGAAATGCTTCAATTTCAAGACAGATTGCATTCGCATGCATATTTTCGTAAAGCAGCTGCTGGAGCTATCAGATGTTATATAAAATTGCATGATTCTCCTCCAAAGTCAACAGCTGAGGAGGATGATGAAATGTCTAAGTTGCTTCCTGCTCAGAAAAAGAAATTGAAGCAAAAACAGAGAAAGGCAGAAGCAAGAGCTAAAAAAGCAGCAGAAGAGAAAAATGAAGAAACAAGTGCTAGTGGGCCATCAAAGTCCGGGAAACGTCATACAAAACCCGTTGATCCAGATCCTCGAGGGGAAAAGTTGCTGCAGGTTGAAGATCCATTGTTGGAAGCCACAAAATACTTGAAGTTGCTGCAGAAGAATTCACCTGATTCGTTGGAGACACACTTGCTCTCCTTTGAATTATACATGAGAAAACAGAAGATTTTGCTAGCCTTCCAGGCATTAAAACAATTGCTGAGATTGGATGCTGAACACCCTGATTCTCATCGTTGCTTGATTAAATTCTTCCATAAAGTGGGATCCATGAATACTCCTGTGACTGACAGTGAGAAACTCGTTTGGAGTGTCTTAGAAGCTGAGCGTCAAACTATAAGTCAGCTACACGGGAAATCTCTGCTTGAGGCAAATAACCTTTTCCTTGAAAAACATGAAGGTTCTTTGATGCATAGAGCTGCTGTTGGAGAAATGATGTACATTTTAGATCCCAATAGAAGATCTGAGGTTGTCAAGTTGATTGAAGGGTCACCAAATAACCCCGCGCCTAGAAATGGCGCACTTGGACCAATCCGGGAATGGACACTTAAAGACTGTATTGCAGTTCATAAACTTCTTGGATCAGTCCTTGATGATCAGGATGCTGCATTGAGATGGAAAGTGCGATGTGCTGAGTTTTTCCCATACTCCACATACTTTGAGGGTAGTCAAAGCTCTGCCACACCCAACTCTGCTCTCAATCAAATATGCAAAACCACTGTAAATGGGAGTTCTAGCCATTCACAAGGCGACCATGTGGAACATGTCGCATCAAACGGCAAACTAGAAGCATTTAAAGATCTCACTATCTGA 2790 0.4108 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKVCCIWFCTIHQSLIFFSSDAPSLTFALLQNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKSNHRMNWIGFAVSHHLNSNASKAIEILEAYEGTLEDDYPPENERIEHGEMVLYKVSLLEECGFFERAFEELQKKEPKIVDKLGYKEQEVSLLVKLGRLEEAEKLYQTLLSMNPDNYKYYEGLQRCVGLYSENGDFSPDEIDRLDTLYKTLREQFKWSSAVKRIPLDFLQGDRFREAADNYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELENSIRTTGQYPGRAEKEPPSTLMWTLFLLAQHYDRRGQHEIALSKINEAIEHTPTVIDLYSAKSRILKHAGDLAAAAAFADEARCMDLGDRYVNSECVKRMLQADQMVLAEKTAVLFTKDGDQHNNLHDMQCMWYELASAESCFRQGDLGLSLKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLQFQDRLHSHAYFRKAAAGAIRCYIKLHDSPPKSTAEEDDEMSKLLPAQKKKLKQKQRKAEARAKKAAEEKNEETSASGPSKSGKRHTKPVDPDPRGEKLLQVEDPLLEATKYLKLLQKNSPDSLETHLLSFELYMRKQKILLAFQALKQLLRLDAEHPDSHRCLIKFFHKVGSMNTPVTDSEKLVWSVLEAERQTISQLHGKSLLEANNLFLEKHEGSLMHRAAVGEMMYILDPNRRSEVVKLIEGSPNNPAPRNGALGPIREWTLKDCIAVHKLLGSVLDDQDAALRWKVRCAEFFPYSTYFEGSQSSATPNSALNQICKTTVNGSSSHSQGDHVEHVASNGKLEAFKDLTI* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4954 929 MobiDBLite consensus disorder prediction 660 674 - -
Tpr7g4954 929 SUPERFAMILY TPR-like 13 469 IPR011990 GO:0005515
Tpr7g4954 929 Gene3D - 534 755 - -
Tpr7g4954 929 MobiDBLite consensus disorder prediction 622 674 - -
Tpr7g4954 929 Pfam N-terminal acetyltransferase A, auxiliary subunit 215 725 IPR021183 -
Tpr7g4954 929 MobiDBLite consensus disorder prediction 637 651 - -
Tpr7g4954 929 Coils Coil 625 652 - -
Tpr7g4954 929 Pfam TPR repeat 113 152 - -
Tpr7g4954 929 Gene3D - 2 532 - -
Tpr7g4954 929 PANTHER BNAC02G23120D PROTEIN 10 71 - -
Tpr7g4954 929 PANTHER BNAC02G23120D PROTEIN 100 912 - -
Tpr7g4954 929 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 71 - -
Tpr7g4954 929 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 100 912 - -
Tpr7g4954 929 PIRSF NAT_A 78 847 IPR021183 -
Tpr7g4954 929 PIRSF NAT_A 1 75 IPR021183 -
Tpr7g4954 929 ProSiteProfiles TPR repeat profile. 106 139 IPR019734 GO:0005515
Tpr7g4954 929 SMART tpr_5 252 285 IPR019734 GO:0005515
Tpr7g4954 929 SMART tpr_5 409 442 IPR019734 GO:0005515
Tpr7g4954 929 SMART tpr_5 106 139 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4954 Tpr-Chr7 57323345 57334549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4954 K20792 - gmx:100776968 1534.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4954 7 57323345 57334549 Tpr7g4954 7 57323345 57334549 ECH
Tpr7g4954 7 57323345 57334549 Tpr4g0594 4 5554304 5575742 PCT