Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0594 ATGGGTGCTTCACTGCCTCCTAAAGAGGCTAACCTCTTCAAGCTTATTGTTAAATCATATGAAACCAAGCAGTATAAAAAGGGGCTCAAGGCAGCTGATGCTATTTTGAAAAAATTTCCAGACCATGGAGAAACTTTATCAATGAAGGGTTTAACATTAAATTGCATGGATCGTAAGTCTGAAGCATATGAACTTGTTCGTCAAGGATTGAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTTTGGTCTCCTTTATCGGTCAGACAGAGAATACAGGGAGGCAATCAAGTGCTACCGAAATGCATTGAGAATAGATCCCGACAATATTGAAATTCTGCGCGACTTATCACTCTTACAGGCTCAAATGAGAGATTTATCTGGCTTTGTTGAGACTAGACAACAACTTTTGACTCTTAAGCCAAATCATCGCATGAACTGGATTGGTTTTTCTGTTGCCCATCATTTAAATTCTAATGGGTCCAAGGCTGTGGAAATTTTGGAAGCATATGAAGGGACTTTAGAAAAAGACCATCCTCCAGATAATGAACGGTGCGAGCATGGGGAAATGATTTTATATAAGATCTCTTTGTTAGAGGAATGCGGATTTCTTGATAGAGCTCTTGAAGAGTTGCGCCAAAAAGAAACAAAAATTGTTGATAAACTTGCTTTTAAAGAACAAGAGGTTTCACTTCTTGTGAAGCTTGGTCATTTAGAAGAAGCAGAAACGATATACAGGATATTACTTTCCATGAATCCTGATAATTATAGTTACTACGAGGGTCTCCAAAAGTGTGCTGGATTATATTTAGAAGATGGGAAGTACTCTTCTGATCAAATAGATCAGTTAGTTGCGTTGTATGAAACACTTGGGCAGCAATATAAGTGGTCTTCTGCAGTTAAGAGAATACCCCTGGATTTTTTACAAGGTGACAAATTTCGAGAAGCAGCAGAAAGTTATATTAGGCCTCTCTTAACTAAGGGAGTTCCATCTCTGTTTTCTGATCTTTCTTCTTTGTACAATCATCCTGGGAAGGCAGACATTTTGGAACAAATTATTCTTGAGTTAGAGCATTCAATTAGGACATCAAGCCAATATCCTGGGAGTACGGAGAAAGAATCCCCTTCAACTCATTTGTGGACTTTGTTTTTCTTGGCTCAGCATTATGACAGGCGTGGCCAATATGAGATTTCTCTTTCTAAAATCGACGAGGCTATAGAACACACACCTACTGTCATTGATCTATATTCTGTCAAGAGTCGGATATTGAAGCATGCTGGTGATTTGAATGCTGCTGCTGAATTTGCAGATGAAGCAAGGCGTATGGACCTTGCTGATCGTTATGTTAATAGTGAATGTGTTAAGCGCATGCTGCAGGCTGATCAGGTGGCTTTGGCAGAAAAAATAGCTGTGTTGTTCACAAAAGATGGGGATCAACATAACAACCTTCATGATATGCAATGCATGTGGTACGAGCTTGCCTCGGGTGAAAGCTTTTTCCGCCAGGGCAATCTTGGGCGGGCTCTCAAGAAATTTTTAGCAGTGGAGAAGCATCATGCTGATATTACCGAGGACCAATTTGATTTTCATTCATATTGCTTAAGGAAAATGACTTTGCGTATGTATGTTGAAATGCTTAAATTTCAAGATCAATTGCACTCACATGCATATTTTCATAAAGCCGCAGCAGGAGCTATCAGATCTTATATTAAGTTGCACGATTTTCCCCCAAAGTCTACAGCAGAGGAAGATGAGCATATGTCAAATTTGCTCCCTTCTCAGAAAAAGAAAATGCGACAAAAGCAAAGAAAGGCAGAAGCAAGAGCTAAGAAAGATGCAGAAGAAAAGAATGAAGAGTTAAATTCTAGTGCGGTATCAAAGTCTGGGAAACGAAATGTAAAACCTGTTGATTCTGATCCACACGGGGAGAAGTTATTGCAGGTCGAGGATCCACTGTCTGAAGCTGTTAAATACTTGAAGTTGCTGCAGAAGAATTCACCCGATTCATTGGAAACTCATTTGCTCTCTTTTGAATTATATACAAGGAAACGGAAAATTTTGCTTGCCTTTCAGGCTGTAAAGCAGTTACTGAGGTTGGATGCTGACCACCCTGATTCTCACCGTTGCTTGATTAAATTTTTCCATCAATTGGGATCCATGAGTACTCCTGTGACTGAAAGCGAAAAACTGATATGGAGTGTCTTAGAAGCCGAACGCCCAACTATTAGTCAGCTGCATGAGAAATCTCTTTTTGACTCAAACAATGCTTTCCTTGACAATCATAAAGATTCTTTGATGCATAGAGCAGCTTTTACGGAAATCTTGTACATTTTGGATTCTAACAGAAAGTCTGAGGCTGTCAAGTTGATTGAAGAGTCAGCAAATAATATTGTTCCAAGAAATGGAGCAATCGGGCCAATCGGAGAATGGAAACTTAAAGACTGTATTGCAGTTCACCAGCTTCTTGGAACAGTACTTGTTGACCAAGATGCGGCATTGAGGTGGAAAGTGCGTTGTGCAGAGTACTTCCCTTATTCAACGTACTTTGAGGGAAGGCACAGCTCTGCCTCTCCCAACTCAGCCTTCAACCAGTTACGTAAGAATTCTGAAAAAGATAGTCCTAATCATTCAGTTGGTAATCAAAATGTGGTCTCCACCACATCAAACGGGAAAGCATTTGAAAATCTCACTATCTGA 2700 0.3981 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVFGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNGSKAVEILEAYEGTLEKDHPPDNERCEHGEMILYKISLLEECGFLDRALEELRQKETKIVDKLAFKEQEVSLLVKLGHLEEAETIYRILLSMNPDNYSYYEGLQKCAGLYLEDGKYSSDQIDQLVALYETLGQQYKWSSAVKRIPLDFLQGDKFREAAESYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQIILELEHSIRTSSQYPGSTEKESPSTHLWTLFFLAQHYDRRGQYEISLSKIDEAIEHTPTVIDLYSVKSRILKHAGDLNAAAEFADEARRMDLADRYVNSECVKRMLQADQVALAEKIAVLFTKDGDQHNNLHDMQCMWYELASGESFFRQGNLGRALKKFLAVEKHHADITEDQFDFHSYCLRKMTLRMYVEMLKFQDQLHSHAYFHKAAAGAIRSYIKLHDFPPKSTAEEDEHMSNLLPSQKKKMRQKQRKAEARAKKDAEEKNEELNSSAVSKSGKRNVKPVDSDPHGEKLLQVEDPLSEAVKYLKLLQKNSPDSLETHLLSFELYTRKRKILLAFQAVKQLLRLDADHPDSHRCLIKFFHQLGSMSTPVTESEKLIWSVLEAERPTISQLHEKSLFDSNNAFLDNHKDSLMHRAAFTEILYILDSNRKSEAVKLIEESANNIVPRNGAIGPIGEWKLKDCIAVHQLLGTVLVDQDAALRWKVRCAEYFPYSTYFEGRHSSASPNSAFNQLRKNSEKDSPNHSVGNQNVVSTTSNGKAFENLTI* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0594 899 MobiDBLite consensus disorder prediction 854 886 - -
Tpr4g0594 899 MobiDBLite consensus disorder prediction 579 644 - -
Tpr4g0594 899 SMART tpr_5 43 76 IPR019734 GO:0005515
Tpr4g0594 899 SMART tpr_5 77 110 IPR019734 GO:0005515
Tpr4g0594 899 SMART tpr_5 380 413 IPR019734 GO:0005515
Tpr4g0594 899 Pfam TPR repeat 84 123 - -
Tpr4g0594 899 SUPERFAMILY TPR-like 233 454 IPR011990 GO:0005515
Tpr4g0594 899 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Tpr4g0594 899 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Tpr4g0594 899 Gene3D - 2 503 - -
Tpr4g0594 899 SUPERFAMILY TPR-like 21 262 IPR011990 GO:0005515
Tpr4g0594 899 MobiDBLite consensus disorder prediction 606 622 - -
Tpr4g0594 899 Coils Coil 209 229 - -
Tpr4g0594 899 Gene3D - 505 725 - -
Tpr4g0594 899 Coils Coil 596 624 - -
Tpr4g0594 899 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 875 - -
Tpr4g0594 899 MobiDBLite consensus disorder prediction 579 593 - -
Tpr4g0594 899 PANTHER BNAC02G23120D PROTEIN 10 875 - -
Tpr4g0594 899 PIRSF NAT_A 1 818 IPR021183 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0594 Tpr-Chr4 5554304 5575742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0594 K20792 - gmx:100820094 1580.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0594 4 5554304 5575742 Tpr4g0594 4 5554304 5575742 ECH
Tpr7g4954 7 57323345 57334549 Tpr4g0594 4 5554304 5575742 PCT