Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4950 ATGATTGTTGAAGAAAGGAAAATAATGGAGGAAAGTAGCAACAATAGAGGTGAATTTCAAGCTAGTTTAGCTAAACTTTCTTCATTGAGGTCAGGTGGAAGTTTTAAATCAACATTATCGGGAAGAACAACTCCGCGAAGTAATTCTCCTTCGTTTCGGAGATTAAATACTAGTCGTACGCCGAGAAAAGATGGAAGGGGTTTTGGTGGTTCGGTGTTGTTTAGGAGCAATCGTGTGTTATTGTGGTTGCTTCTAATTACCCTATGGGCTTATCTTGGATTTTTTGTTCAGTCTAGGTGGGCACATAGTGATAAGAAAGAGGAATTTTCTGGCTTTGGAACCGGGCCAAGAAATACTGGCATAGATGCTGATCCGAGTCTTCGTCGTGATTTGATTGCTAGTGAGGACTCGTCATCTGTTAATAATGAGACAGTTAGAAATAAAGGGGGGATTGGTAGAACAATAAATGTAGCTTTGGCAAAGAAAGAAAATGATGAGGATGGTGTTTCCCCTCCAAAAGGTAAAGCAAGCTCGAAGAAGAAGAAGAAGAGCAGGCGATCTTCGAGAGGTAAAGCTCGTGGTAAGAAGAAACCAACAGTGGAAGTTAAGGACGATGATATAGAGGAGCCGGAACCGGAAATACCTCAAACAAATAGTACATATGGATTACTTGTTGGACCATTTGGCTCAACGGAAGATAGGATTTTGGAATGGAGTCCTCAGAAACGTTCCGGGACATGTAATAGGAAGGGGGACTTTGCACGTCTTGTTTGGTCCAGAAGATTTATCTTGATATTCCATGAGCTTTCTATGACCGGAGCTCCACTCTCAATGTTGGAATTGGCAACAGAACTTTTGAGCTGTGGTGCCACTGTTTCAGCTATTGCACTTAGCAAGAAGGGTGGTTTGATGTCAGAGCTTTCTAGAAGACGAATCAAGGTGCTCGAGGACAAAGCAGATCTCAGCTTCAAAACTGCAATGAAGGCCGATCTTGTAATTGCTGGTTCAGCTGTATGTGCTTCATGGATTGAAAAATATATTGAACGTTTTCCTGCTGGTGCGAGCCAAGTTGCTTGGTGGCTCATGGAAAACCGTAGAGAGTACTTCGACCGTTCAAAGGGTGTCTTGCACAGAGTAAAGATGTTGGTTTTTCTTTCTGAATCACAATCTAAACAATGGCAAAAATGGTGCGAAGAAGAAAACATAAAACTGCGATCACAACCTGAAATTGTTCCTTTGTCTGTTAATGATGAACTGGCATTTGTAGCCGGCATTTCTTCTACACTTAATACTCCGTCTTTTAGTACTGATAAAATGATTGAGAAAAGGCAGTTGTTGCGAGAATCGGTCCGAAAAGAAATGGGATTAACTGATAATGATATGCTTGTGATATCTCTGAGTAGCATCAACCCTGGAAAGGGCCAGCTTTTGCTTCTTGAATCAGCAAGCTCAGTAATAGAACAAGGACTGTTGCAAGATGATAAGAAAATGAAAAAATTATCAAATATAAAGGAAAACTTGTCTACTATGACTAGAAAACGTCGTATTAGAAAATTGTTACCATTGTTGAAGGATGGCAAAGTAGCAAGCAATTCTTTAAGCAGAAGGAAACAGTTGTTGGCTAATAACAAAGAAACAATGCAACAATCTCTCAAAATTCTCATTGGTTCTGTTGGATCTAAAAGTAACAAAGGGGATTATGTTAAAAGTCTTCTGAGTTTCTTAGAACAGCATCCAAACACTTCGAAATCCGTTTTGTGGACTCCATCCACAACACAGGTTGCCTCACTATACTCTGCTGCAGATGTTTATGCCATAAACTCTCAGGGACTTGGAGAGACATTTGGACGGGTGACTATAGAAGCAATGGCATTTGGTCTTCCGGTTCTTGGAACGGATGCTGGGGGAACGAAGGAGATAGTTGAGAACAATGTTACAGGTCTTCTTCATCCAATCGGACGTTCAGCAGGGAACGACGTCCTTGCGCAGAATCTTCTTTATTTGCTTAAAAACCAGTTGGCAAGAAAGCAAATGGGGATAGAAGGCAGGAAAAAAGTGGAGAGGATGTATTTAAAGCAACACATGTATAAGAAATTTGTTGATGTTATTGTTAGGTGCATGAGAAGCAAATAA 2133 0.4065 MIVEERKIMEESSNNRGEFQASLAKLSSLRSGGSFKSTLSGRTTPRSNSPSFRRLNTSRTPRKDGRGFGGSVLFRSNRVLLWLLLITLWAYLGFFVQSRWAHSDKKEEFSGFGTGPRNTGIDADPSLRRDLIASEDSSSVNNETVRNKGGIGRTINVALAKKENDEDGVSPPKGKASSKKKKKSRRSSRGKARGKKKPTVEVKDDDIEEPEPEIPQTNSTYGLLVGPFGSTEDRILEWSPQKRSGTCNRKGDFARLVWSRRFILIFHELSMTGAPLSMLELATELLSCGATVSAIALSKKGGLMSELSRRRIKVLEDKADLSFKTAMKADLVIAGSAVCASWIEKYIERFPAGASQVAWWLMENRREYFDRSKGVLHRVKMLVFLSESQSKQWQKWCEEENIKLRSQPEIVPLSVNDELAFVAGISSTLNTPSFSTDKMIEKRQLLRESVRKEMGLTDNDMLVISLSSINPGKGQLLLLESASSVIEQGLLQDDKKMKKLSNIKENLSTMTRKRRIRKLLPLLKDGKVASNSLSRRKQLLANNKETMQQSLKILIGSVGSKSNKGDYVKSLLSFLEQHPNTSKSVLWTPSTTQVASLYSAADVYAINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTKEIVENNVTGLLHPIGRSAGNDVLAQNLLYLLKNQLARKQMGIEGRKKVERMYLKQHMYKKFVDVIVRCMRSK* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4950 710 Pfam Glycosyl-transferase family 4 258 427 IPR041693 -
Tpr7g4950 710 PANTHER BNAA05G14870D PROTEIN 9 710 - -
Tpr7g4950 710 MobiDBLite consensus disorder prediction 34 56 - -
Tpr7g4950 710 MobiDBLite consensus disorder prediction 34 61 - -
Tpr7g4950 710 MobiDBLite consensus disorder prediction 175 193 - -
Tpr7g4950 710 Pfam Glycosyl transferases group 1 539 684 IPR001296 GO:0016757
Tpr7g4950 710 PANTHER BNAA05G14870D PROTEIN 9 710 - -
Tpr7g4950 710 CDD GT4_PimA-like 263 703 - -
Tpr7g4950 710 Gene3D Glycogen Phosphorylase B; 434 690 - -
Tpr7g4950 710 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 267 703 - -
Tpr7g4950 710 MobiDBLite consensus disorder prediction 162 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4950 Tpr-Chr7 57273076 57277810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4950 33 708 Glycosyltransferase AT3G15940 61.505 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4950 - - mtr:MTR_2g102283 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4950 7 57273076 57277810 Tpr7g4950 7 57273076 57277810 ECH
Tpr7g4950 7 57273076 57277810 Tpr4g0596 4 5594296 5597755 PCT