Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0596 ATGGAGGAATGCAACAACAATAGAGGAGAATCTTCATCAAGATCAATTCAACAACAACAACAACATTCACCTTCGTTTCGAAGAAGAGAAAGCAAAGGTAATAGTAATGCACAGTTAACTTGGATTGGAAGCAACCGGTTAGTTTTATGGCTGATTTTGATTACCCTTTGGGCTTATCTTGGTTTTTTTGTTCAATCTAAATGGGAAGCTTATGAAAAAGAACAAGAACTTAAAGGGTTTGATTTTCATCTTAATAATCATCAAGATTTGGTTATCAAAAAAAGTTCTTTATTAGTTGATAATGAAAAAGTTGGTTTGAATAATCATAATCATATGGATGTTGTATTGGCCAAGAAAGGAGAAAATGGTAAAAATGGCTTAAAGAAAAGGAAGAATAGAAGATCTTTGAGAAGTAAACACAAGAGAGAATTGAAAGTTGAGAGCAGTATTGATGATATAGATGAAAAGGAGTTAGAAAAAATTCATCTTGTTGGTCCATTTGGTTCAATAGAGAACAAAATTTTGAAGCTTAGTAGTACTAATAATGAGAAGTGTTGTGGAAAATGTGACAAGAAAAGTGATTTTGCAAAAGTTATTTTTTCAAAGAGGTTTGTGTTGATATTTCATGAACTTTCTATGACTGGAGCACCACTTTCAATGATGGAATTGGCAACTGAATTGATGAGTTGTGGAGCAAATGTTTCAGCTGTTGTTCTTAGTAAAAAAGGTGGTTTAATGGAAGAGCTTATTAGGAAGAAGATTAAGGTGATTGATGATAAAGTTGATCATAGCTTTAAAGCTGCAAGGAAAGCTGATCTTGTCATTGCTGGATCAGCTGTTTGTTCTTCATGGATTGAACAATACATTGAATACTTTCCTTCTAGTGCAAGTAAAGTTGTTTGGTGGATTATGGAAAACCGAAGAGAGTACTTTGATCGTTCAAAACACGTTTTGAACAAAGTAAAGATGTTGGTTTTTCTTTCCGAATCGCAATCTAAGAAATGGCAAAAATGGTATGAAGAAGAAAACAGAAGACTTAGATTCCAGCCAGCAATTGTTCCATTGTCTGTTAATGATGAACTTGCTTATGCAGCCGGAATTCATTCCTCGAGTACTTCCGATAAAATCAATGAGAAGAGGAAATTTTTGCGCAAAACAGTCCGAAAAGAATTAGGCTTGAATGATAATGATATGCTTGTGATATCTCTAAGTAGCATCAATCCTGGAAAGGGTCAGTTATTATTTCTTGAATCAGCAAACTCAGTAATAGAAAATGAATCATTTCAAGAACATCATAAGAAAAAGCAAACTTTATCACAAGTTACTTTGGCTAGAAGATATCATATTAGAAAATTGTTGCCAATGATGAAGGATAGCAATTCTATAAACAGTAACAGTGGAAAAATGAAACAATCTCTGAAAGTTCTGATTGGTTCTGTTGGATCAAAGAGTAACAAAGTGGATTATGCTAAGAGTATGATAAGTTTCTTGTCACAACATTCAAACTTGTCAAAATCAGTTCTGTGGACTCCAGCTACAACACATGTTGCCTCACTTTACTCTGCTGCTGATGTTTATGTCATAAACTCTCAGGGATCGGGAGAAACCTTCGGACGCGTGACAATAGAAGCAATGGCATTTGGTCTTCCGGTGTTAGGAACAGATGCTGGTGGAACAAAGGAAATTGTGGAGAATAATGTGACTGGTCTTCATCATCCTATTGGACGTAAAGGGAATCATATTCTTGCAAAAAATCTTAGGTTTTTACTTGAAAACCGATTTGCAAGAGACAAAATGGGAATGAATGGAAGAAAAAAGGTGCAAAGGAAGTACTTGAAGCAACACATGTATAGTAAATTTGTAAAGGCTCTTGTTAGATGTATGAGAAGCAAATAA 1896 0.3444 MEECNNNRGESSSRSIQQQQQHSPSFRRRESKGNSNAQLTWIGSNRLVLWLILITLWAYLGFFVQSKWEAYEKEQELKGFDFHLNNHQDLVIKKSSLLVDNEKVGLNNHNHMDVVLAKKGENGKNGLKKRKNRRSLRSKHKRELKVESSIDDIDEKELEKIHLVGPFGSIENKILKLSSTNNEKCCGKCDKKSDFAKVIFSKRFVLIFHELSMTGAPLSMMELATELMSCGANVSAVVLSKKGGLMEELIRKKIKVIDDKVDHSFKAARKADLVIAGSAVCSSWIEQYIEYFPSSASKVVWWIMENRREYFDRSKHVLNKVKMLVFLSESQSKKWQKWYEEENRRLRFQPAIVPLSVNDELAYAAGIHSSSTSDKINEKRKFLRKTVRKELGLNDNDMLVISLSSINPGKGQLLFLESANSVIENESFQEHHKKKQTLSQVTLARRYHIRKLLPMMKDSNSINSNSGKMKQSLKVLIGSVGSKSNKVDYAKSMISFLSQHSNLSKSVLWTPATTHVASLYSAADVYVINSQGSGETFGRVTIEAMAFGLPVLGTDAGGTKEIVENNVTGLHHPIGRKGNHILAKNLRFLLENRFARDKMGMNGRKKVQRKYLKQHMYSKFVKALVRCMRSK* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0596 631 CDD GT4_PimA-like 203 624 - -
Tpr4g0596 631 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 207 622 - -
Tpr4g0596 631 PANTHER BNAA05G14870D PROTEIN 11 631 - -
Tpr4g0596 631 Pfam Glycosyl transferases group 1 432 605 IPR001296 GO:0016757
Tpr4g0596 631 Gene3D Glycogen Phosphorylase B; 250 353 - -
Tpr4g0596 631 MobiDBLite consensus disorder prediction 1 31 - -
Tpr4g0596 631 Gene3D Glycogen Phosphorylase B; 354 423 - -
Tpr4g0596 631 MobiDBLite consensus disorder prediction 8 31 - -
Tpr4g0596 631 Gene3D Glycogen Phosphorylase B; 497 611 - -
Tpr4g0596 631 Pfam Glycosyl-transferase family 4 201 369 IPR041693 -
Tpr4g0596 631 PANTHER BNAA05G14870D PROTEIN 11 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0596 Tpr-Chr4 5594296 5597755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0596 29 629 Glycosyltransferase AT1G52420 51.090 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0596 - - cam:101493983 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0596 4 5594296 5597755 Tpr4g0596 4 5594296 5597755 ECH
Tpr7g4950 7 57273076 57277810 Tpr4g0596 4 5594296 5597755 PCT