Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4888 ATGGAAAGCAATCTACCAGTGATGTCAAAGAGAGTATGGAAAATGGTACGTGTGGTATTCTTCATGTTAAGAAAAGGCATATCAAAGGGCAAATTAATGATGGGACTAAACATGATGCTCAAACGCCGTGGAAAGCTTGCCGGAAAAGCCATTGCCAATTTAATGTTCCACCATCATAGCCACCACAACAATGGCGGCTCCACCTCAAGCAGCCGCTCCCATGATTCACACCACCAATTCACTAGGGAGTATGAATTTAGCTGCAGCAACACTCCCCACCACTTCTTTCCAATAGGGAAGCGTCACCGCAGCCACAACAATTTCTTCACTTGCGCTCACGTGCCATCTACACAGGATGATGATGTGGCAACAATGAGTGCAATGAAGGCAGTGTTAGAGATGCTTAACAATGATCAAACGATTGTAGAAGCATCTCCAGCACTGCCCGGATTCGGACGGAGTCCAATGGTGAGGCAATTGAGGGTGACTGACTCGCCATTTCCTTTAAGAGAAGATGATGAAAAGGACAATCAAGTTGATAAGGCAGCTGAAGATTTCATAAACAGGTTTTACAGCCAATTGAGAAAGCAAGATTGA 597 0.4489 MESNLPVMSKRVWKMVRVVFFMLRKGISKGKLMMGLNMMLKRRGKLAGKAIANLMFHHHSHHNNGGSTSSSRSHDSHHQFTREYEFSCSNTPHHFFPIGKRHRSHNNFFTCAHVPSTQDDDVATMSAMKAVLEMLNNDQTIVEASPALPGFGRSPMVRQLRVTDSPFPLREDDEKDNQVDKAAEDFINRFYSQLRKQD* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4888 198 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 197 - -
Tpr7g4888 198 Pfam Cotton fibre expressed protein 176 197 IPR008480 -
Tpr7g4888 198 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4888 Tpr-Chr7 56844709 56845587 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4888 - - gmx:100786928 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4888 7 56844709 56845587 Tpr5g2504 5 46857622 46858497 PCT