Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2504 ATGGAAAACAACGTATCAATTATAACTAAGAGAGTATGGAGCATGATACGTGTGGCCTTGTTCATGTTAAGAAAAGGCATATTAAAGGGAAAATTAATGATGGATCTCAACATGACGGTCAAACGTCGCAGTAAGCTTGCCGGTAAAGCCATCGCCAACCTCATGTTCCCACACCACCATGGCGGCTTCACCTCAAGAAGCCGGCCCCACAACGAGAAACGCATCTCTACCACAAGGGAGTATGAATTCACCTGCAGCAACACACCAAATTACAAATTTACTCTTAACAATAAGCGTCACCGCAACAACCATTTATTTGCGTGTGCTCACGCTCCTCTCACACAAGACGAAGAGATTGTGACCGTTAATGCGGTTAAGGCTGTGTTGGAAAATATTGTAAATAATAATGAGGTGATGGTGGATGCTTCCCCGGTGCTCGTGGGGTATGGAGAGACTCCTAAGGATATTGACACTGATGTCGAGGTGGACGAGGCAGCCGAAGCGTTCATAAAGAGGTTCTACTTGCAATTGGGGAAGCAGAATTGA 546 0.4542 MENNVSIITKRVWSMIRVALFMLRKGILKGKLMMDLNMTVKRRSKLAGKAIANLMFPHHHGGFTSRSRPHNEKRISTTREYEFTCSNTPNYKFTLNNKRHRNNHLFACAHAPLTQDEEIVTVNAVKAVLENIVNNNEVMVDASPVLVGYGETPKDIDTDVEVDEAAEAFIKRFYLQLGKQN* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2504 181 Pfam Cotton fibre expressed protein 161 177 IPR008480 -
Tpr5g2504 181 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 180 - -
Tpr5g2504 181 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2504 Tpr-Chr5 46857622 46858497 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2504 - - gmx:100786928 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4888 7 56844709 56845587 Tpr5g2504 5 46857622 46858497 PCT