Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4880 ATGGATAGAAACAACTCTCGTAGACAACTTGCTGCAATGAAACAGTCCCTCTTTGATCAGGGACATCTTGATGAGCAATTTATCCAACTTGAAGAATTGCAAGATGATGCTAATCCTAATTTTGTTGAGGAAATTGTAACTCTTTACTACCGTGATTCATCTAGGCTTATCTCTAGCTTGGAACAAACACTGGAGAGGAATCCATTGGATTTCAACAAGTTGGACACAATCATGCACCAATTTAAAGGAAGCAGCTCAAGCATAGGGGCCAAAAAGGTGAAAGCAGAATCCACTCTAATTAGGGAATATTGCAGGACAGGAAATGCAGAAGGGTGTAGGAAGAGCTTTCAACAAATGAAGAAAGAATATGTAGCATTGAGAAAGAGACTTGAAAATTATTTTCAACTAGTTAGGCAAGCTGGGCCTATGGAGAGAGCATGTCGCCCAAAGTAG 453 0.3996 MDRNNSRRQLAAMKQSLFDQGHLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISSLEQTLERNPLDFNKLDTIMHQFKGSSSSIGAKKVKAESTLIREYCRTGNAEGCRKSFQQMKKEYVALRKRLENYFQLVRQAGPMERACRPK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4880 150 Pfam Hpt domain 44 127 IPR008207 GO:0000160
Tpr7g4880 150 PANTHER - 3 146 IPR045871 GO:0000160|GO:0009927|GO:0043424
Tpr7g4880 150 Coils Coil 116 136 - -
Tpr7g4880 150 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Tpr7g4880 150 Gene3D HPT domain 1 145 IPR036641 GO:0000160
Tpr7g4880 150 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 7 139 IPR036641 GO:0000160
Tpr7g4880 150 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 3 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4880 Tpr-Chr7 56724660 56726554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4880 K14490 - gmx:100526849 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4880 7 56724660 56726554 Tpr5g2489 5 46584591 46587408 PCT