Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2489 ATGGAGCAAAACCAATCTCGTATTCAACTTGTTGCAATGAAACAGTCCTTCTTTGATCAGGGATTGCTTGATGAACAATTTATCCAACTAGAAGAACTGCAGGATGATGTTAATCCTAACTTTGTTGAGGAAATTGTCATTCTTTACTACGGTGATTCGTTACGCCTTATTTCAAGCATAGAGCAGGCTCTCAAGGAGAGGAACCTACTAGATTTCAACAAGCTGGACACACTTATGCATCAATTCACTGGAAGTAGTTCAAGCATCGGAGCCAAAAAGGTGAAAGCAGAGTGCAACCTGTTTAGGGAATATTGCAGGGCAGGAAATATTGAAGGATGTATGAAGAGTTTCCAACAATGTAAGAAAGAATATGCTTCACTAAGAAAGAAGCTTGAAGCTTATTTTCAGTTGGCTAGGCAAGTTGGGTCCTCGGAGGCAGCATGCCGCTCCAAGTGA 456 0.4123 MEQNQSRIQLVAMKQSFFDQGLLDEQFIQLEELQDDVNPNFVEEIVILYYGDSLRLISSIEQALKERNLLDFNKLDTLMHQFTGSSSSIGAKKVKAECNLFREYCRAGNIEGCMKSFQQCKKEYASLRKKLEAYFQLARQVGSSEAACRSK* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2489 151 Pfam Hpt domain 46 128 IPR008207 GO:0000160
Tpr5g2489 151 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 4 147 - -
Tpr5g2489 151 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 10 140 IPR036641 GO:0000160
Tpr5g2489 151 Gene3D HPT domain 1 148 IPR036641 GO:0000160
Tpr5g2489 151 PANTHER - 4 147 IPR045871 GO:0000160|GO:0009927|GO:0043424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2489 Tpr-Chr5 46584591 46587408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2489 K14490 - gmx:100798055 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4880 7 56724660 56726554 Tpr5g2489 5 46584591 46587408 PCT