Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4855 ATGAACGGTGCCGAGGTTGTTGCAGCTCCGGCGGGTCCACCGGTTCCTCTTGACTGGAAATTCTCTCAGGTGTTCGGTGAACGTACGGCTGGTGAAGAGGTTCAAGAAGTGGACATAATTTCTGCTATCGAATTTGACAAGTCTGGTGATCATCTTGCTACTGGTGATCGTGGTGGTCGAGTGGTTCTCTTTGAGAGGACAGATACAAAAGATCATGGCGAATCTAGAAGGGATTCAGAGAGGATGGACTATTCTCTCGGTAGGCATCCTGAATTCCGTTACAAAACAGAGTTTCAGAGTCACGAGCCTGAGTTTGACTACCTTAAGAGTTTGGAGATAGAAGAGAAAATCAACAAAATCAGATGGTGCCAAATAGCTAATGGTGCCCTTTTCCTTCTCTCGACAAATGATAAAACCATCAAATTTTGGAAGGTTCAAGAAAAGAAGGTCAAGAAAATTGCTGAGATGAATGTCGACCCTTCGAAATCAATGGGAAATGGCAGTACTGCTAGTTCAAGTAATTCAATTAGTGCTAGGCCAAGCCTTGAAAATGGAGGATTTCCAGATTCAGATAGATCGTTCAATTATCTAAGCTCCGACTTCTCATTTCCACCGGGAGGCATACCATCACTAAGATTACCCGTGGTAGTAAGTAGCCACGAAACCAGCTTGGTGGCTCGTTGTCGTAGAGTTTACGCCCATGCACACGACTATCATATCAATTCTATTTCAAACAACAGCGATGGCGAAACTTTCATATCAGCCGATGATTTGCGAATAAATCTTTGGAATCTGGAAATAAGCAATCAGAGTTTTAATATTGTTGATGTAAAGCCTGCAAACATGGAGGATCTGACAGAGGTTATAACATCAGCAGAATTCCACCCTACACATTGTAATACGTTGGCATATAGCAGCTCAAAGGGTTCAATCCGTCTAATTGACTTGCGGCAATCAGCATTATGTGATTCTCATGCCAAACTGTTTGAGGAACAGGAGGCCCCAGGATCCCGATCATTTTTCACAGAGATTATTGCTTCCATATCTGACATAAAGTTTGGGAAGGATGGGCGATACATACTAAGTCGTGATTACATGACTTTAAAGTTATGGGACATTAATATGGATTCAGGTCCGGTTGCAACTTACCAGGTTCATGAGTATCTTAGACCAAAGCTTTGTGATTTGTATGAAAACGATTCAATCTTTGATAAGTTCGAGTGTTGTCTGAGTGGTGACGGATTGCGAGTAGCAACTGGTTCTTACAGCAATTTATTCCGAGTTTTTGGCTGTGCTCCTGGAAGTACCGAAGCTACAACTTTGGAAGCCAGTAAAAATCCAATGAGGCGACAAGTTCCGACCCCCTCAAGGCCGTCTAGATCATTGGGAAATAGTATAACGCGAGTTGTAAGACGGGGAGCAGAAAACCCTGGTGTTGATGCAAACGGGAATTCGTTTGATTTCACGACAAAGTTGTTGCACTTAGCATGGCATCCATCTGAAAATTCGATTGCTTGTGCTGCTGCAAATAGCTTGTACATGTACTATGCATAA 1554 0.4286 MNGAEVVAAPAGPPVPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDHGESRRDSERMDYSLGRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQIANGALFLLSTNDKTIKFWKVQEKKVKKIAEMNVDPSKSMGNGSTASSSNSISARPSLENGGFPDSDRSFNYLSSDFSFPPGGIPSLRLPVVVSSHETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVATYQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPSRSLGNSITRVVRRGAENPGVDANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4855 517 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 104 118 IPR018067 -
Tpr7g4855 517 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 2 517 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 PIRSF PPA2_B55 13 517 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 MobiDBLite consensus disorder prediction 161 181 - -
Tpr7g4855 517 Pfam WD domain, G-beta repeat 228 264 IPR001680 GO:0005515
Tpr7g4855 517 SMART WD40_4 334 372 IPR001680 GO:0005515
Tpr7g4855 517 SMART WD40_4 30 65 IPR001680 GO:0005515
Tpr7g4855 517 SMART WD40_4 225 264 IPR001680 GO:0005515
Tpr7g4855 517 SMART WD40_4 104 144 IPR001680 GO:0005515
Tpr7g4855 517 SMART WD40_4 275 315 IPR001680 GO:0005515
Tpr7g4855 517 SUPERFAMILY WD40 repeat-like 38 509 IPR036322 GO:0005515
Tpr7g4855 517 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 44 64 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 91 119 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 120 148 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 236 263 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 264 291 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 292 320 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 321 348 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 349 376 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 377 402 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 403 429 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 486 515 IPR000009 GO:0000159|GO:0019888
Tpr7g4855 517 Gene3D - 66 515 IPR015943 GO:0005515
Tpr7g4855 517 MobiDBLite consensus disorder prediction 156 181 - -
Tpr7g4855 517 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 234 248 IPR018067 -
Tpr7g4855 517 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 2 517 - -
Tpr7g4855 517 MobiDBLite consensus disorder prediction 444 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4855 Tpr-Chr7 56527443 56534531 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4855 K04354 - gmx:100799449 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2429 5 45925423 45933428 Tpr7g4855 7 56527443 56534531 ECH
Tpr7g4855 7 56527443 56534531 Tpr7g4855 7 56527443 56534531 ECH
Tpr7g4855 7 56527443 56534531 Tpr5g2429 5 45925423 45933428 PCT