Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2429 ATGAACGGTGGCGATGATGTTGTTGTAGCTTCGGAGGAACCATTGCAACCGTTGGAGTGGAAATTCTCACAGGTTTTTGGTGAACGTGCGGCTGGTGAAGAAGTTCAGGAAGTGGACATAATTTCTGCTATTGAATTTGACAAGTCTGGCAATCATCTTGCTACCGGTGATCGCGGAGGTCGAGTAGTTCTCTTTGAACGGACAGATTCAAAAGATCAGCATGGATCAAGAAGGGATTTGGAGAGTACAGACTATTCTAGTAGTCGGCATCCTGAGTTTCGCTATAAAACAGAATTCCAGAGTCACGAGCCCGAGTTTGATTATCTTAAGAGCTTGGAAATAGAAGAAAAAATTAACAAAATCAAATGGTGCCAAACAGCTAATGGTGCTGTATTCCTTCTATCTACAAATGACAAAACTATCAAATTTTGGAAGGTTCAGGAAAAGAAGGTGAAGAAAATTTCTGACATGAATATTGACCCTTCAAAAGCAATAGGAAATGGATCTAGTTCAAGTAATTCCAATAGTTCTAAGCCACATCTTGCAAATGGAGGATCTTCCGATAAATCATATAATTATCCAAACAATGATTTCTCATTTCCACCAGGAGGCTTACCTTCGCTAAGATTACCCTCGGTAGTAGTTAGCCATGAGACCAGTCTGTTGGCTCGATGTCGTAGAGTATATGCGCATGCTCATGACTATCACATCAATTCTATTTCAAATAACAGTGATGGAGAAACTTTCATATCGGCTGATGATTTGCGAATAAATCTTTGGAACCTGGAAATTAGCAATCAAAGTTTTAATATTGTCGATGTAAAGCCTACAAATATGGAGGATCTGACTGAGGTTATAACATCAGCAGAATTTCATCCTACACATTGTAATACACTGGCATATAGCAGTTCAAAGGGCTCAATTCGTCTTATTGACTTGCGCCAGTCAGCATTATGTGACTCTCACGCCAAACTATTTGAGGAACAGGAGGCCCCTGGGTCCAGATCATTTTTCACAGAGATTATTGCTTCTATCTCAGATATAAAATTTGCAAAGGAGGGAAGATATATACTCAGTCGTGATTACATGACTCTGAAGTTATGGGACATTAATATGGATTCCGGCCCAGTTTCTACCTTCCGTGTTCACGAGTATTTAAGGCCAAAGCTATGTGATTTATACGAAAACGATTCAATTTTTGATAAGTTTGAGTGTTGTCTGAGTGGTGATGGATCGCGAGTTTCAACCGGTTCTTACAGCAATCTATTCCGCGTGTTTGGCTGTGCCCCGGGAAGTACAGAGGCTACAACTTTGGAAGCCAGTAAAAATCCAATGAGACGACAAGTTCCAACACCGTCAAGGCCTTCTAGATCACTTGGAAACAGTTTAACGAGAGTTGTAAGACGCGGAGCTGAGAACACCGGTGTTGACGCAAATGGAAATTCTTTTGATTTTACTACAAAGTTGCTACACTTAGCATGGCATCCAAGTGAAAATTCAATTGCTTGTGCTGCTGCAAATAGCTTATACATGTACTATGCATGA 1545 0.4045 MNGGDDVVVASEEPLQPLEWKFSQVFGERAAGEEVQEVDIISAIEFDKSGNHLATGDRGGRVVLFERTDSKDQHGSRRDLESTDYSSSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGAVFLLSTNDKTIKFWKVQEKKVKKISDMNIDPSKAIGNGSSSSNSNSSKPHLANGGSSDKSYNYPNNDFSFPPGGLPSLRLPSVVVSHETSLLARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAKEGRYILSRDYMTLKLWDINMDSGPVSTFRVHEYLRPKLCDLYENDSIFDKFECCLSGDGSRVSTGSYSNLFRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPSRSLGNSLTRVVRRGAENTGVDANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2429 514 PIRSF PPA2_B55 9 514 IPR000009 GO:0000159|GO:0019888
Tpr5g2429 514 MobiDBLite consensus disorder prediction 441 461 - -
Tpr5g2429 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Tpr5g2429 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 92 120 IPR000009 GO:0000159|GO:0019888
Tpr5g2429 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 121 149 IPR000009 GO:0000159|GO:0019888
Tpr5g2429 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 233 260 IPR000009 GO:0000159|GO:0019888
Tpr5g2429 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 261 288 IPR000009 GO:0000159|GO:0019888
Tpr5g2429 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 289 317 IPR000009 GO:0000159|GO:0019888
Tpr5g2429 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 318 345 IPR000009 GO:0000159|GO:0019888
Tpr5g2429 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 346 373 IPR000009 GO:0000159|GO:0019888
Tpr5g2429 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 374 399 IPR000009 GO:0000159|GO:0019888
Tpr5g2429 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 400 426 IPR000009 GO:0000159|GO:0019888
Tpr5g2429 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 483 512 IPR000009 GO:0000159|GO:0019888
Tpr5g2429 514 Gene3D - 36 214 IPR015943 GO:0005515
Tpr5g2429 514 Gene3D - 321 510 IPR015943 GO:0005515
Tpr5g2429 514 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 3 514 - -
Tpr5g2429 514 MobiDBLite consensus disorder prediction 162 185 - -
Tpr5g2429 514 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 231 245 IPR018067 -
Tpr5g2429 514 SUPERFAMILY WD40 repeat-like 39 506 IPR036322 GO:0005515
Tpr5g2429 514 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 105 119 IPR018067 -
Tpr5g2429 514 SMART WD40_4 31 66 IPR001680 GO:0005515
Tpr5g2429 514 SMART WD40_4 272 312 IPR001680 GO:0005515
Tpr5g2429 514 SMART WD40_4 222 261 IPR001680 GO:0005515
Tpr5g2429 514 SMART WD40_4 105 145 IPR001680 GO:0005515
Tpr5g2429 514 MobiDBLite consensus disorder prediction 68 91 - -
Tpr5g2429 514 Gene3D - 216 320 IPR015943 GO:0005515
Tpr5g2429 514 Pfam WD domain, G-beta repeat 225 261 IPR001680 GO:0005515
Tpr5g2429 514 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 3 514 IPR000009 GO:0000159|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2429 Tpr-Chr5 45925423 45933428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2429 K04354 - gmx:100786941 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2429 5 45925423 45933428 Tpr7g4855 7 56527443 56534531 ECH
Tpr5g2429 5 45925423 45933428 Tpr5g2429 5 45925423 45933428 ECH
Tpr7g4855 7 56527443 56534531 Tpr5g2429 5 45925423 45933428 PCT