Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4853 ATGGCTGGTGTTATAGTGATTTTTGACTTTGACTCAACAATCATTGAATGTGACAGTGATAATTGGGTTCTTGATGAGTTTGGCTTAACCGAAAAATTCTATCAACTTCTTCCTAACATGCTTTGGAATCCTCTCATGGACAAGATGATGAATGAACTTCATTCACAAGGAAAAAAAATTGAAGAAATAGTAGAAGTTCTTAATAGGACTCCAATTCATCCACGCATTATCCCTGCCATTGAAGCTGCTTATTCCCTTGGGTGTGAGCTAAGGATTGTGAGTGATGCAAATAGTTTCTTTATTGAAACAATTTTGAAGCATCATGGGGTGCTGAATTGTTTCTCAAAAATCACTGCAAACCCAAGTTATGTTAATGAAGAAGGGAGGCTCATAATTTGTCCCTACCATGATTATCTAAAATCTTCTCATGGATGTAACCTTTGTCCACCAAATATGTGCAAGGGATTGGTGATGGAAAGGTTACAAAATTCACTTGAGGATGAAGGAAAGAAGAAAATTATTTACTTAGGAGATGGAAATGCAGATTTTTGTCCTAGTTTAAAGCTCAAAGAGAGTGATTATTTGATGCCTAGAATGAACTTTGCATTAAGTGATTTAGTATCTAAAAATTCTAATGACATAAAGGCAAATGTACATGATTGGATGGATGGGGAAGAGCTTGAAAATGTTCTACTTCATATCATCAACAAAGCTAATAACATTGGTAAAGAAAACAACATTGTTGGTCCAAAAATAATCTCAAATGATTGCAAATTGGGGACAGTTTCAATTGATGCTCATAAGATTTTCCCCGAAGCCATCGCAGTTCCTCTTTGA 837 0.3536 MAGVIVIFDFDSTIIECDSDNWVLDEFGLTEKFYQLLPNMLWNPLMDKMMNELHSQGKKIEEIVEVLNRTPIHPRIIPAIEAAYSLGCELRIVSDANSFFIETILKHHGVLNCFSKITANPSYVNEEGRLIICPYHDYLKSSHGCNLCPPNMCKGLVMERLQNSLEDEGKKKIIYLGDGNADFCPSLKLKESDYLMPRMNFALSDLVSKNSNDIKANVHDWMDGEELENVLLHIINKANNIGKENNIVGPKIISNDCKLGTVSIDAHKIFPEAIAVPL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4853 278 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 187 - -
Tpr7g4853 278 Gene3D - 3 192 IPR023214 -
Tpr7g4853 278 Pfam Putative Phosphatase 5 235 IPR016965 GO:0016791
Tpr7g4853 278 SUPERFAMILY HAD-like 5 186 IPR036412 -
Tpr7g4853 278 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 198 IPR006384 GO:0016791
Tpr7g4853 278 PANTHER 2,3-DIKETO-5-METHYLTHIO-1-PHOSPHOPENTANE PHOSPHATASE 1 277 - -
Tpr7g4853 278 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Tpr7g4853 278 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 277 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4853 Tpr-Chr7 56513758 56515988 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4853 K13248 - gmx:100789743 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4853 7 56513758 56515988 Tpr5g2425 5 45895064 45896870 PCT