Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2425 ATGTCTAACATTGTTATTGTCTTCGACTTTGACAAAACCATCATTGATTGTGACAGTGATAACTGGTTGATTGATGAATTGGGTTTCACTGATTTGTTCAATCAACTCCTTCCCACAATGCCATGGAATTCTGTCATGGACAAAATGATGATGGAGTTTCATGCAAATGGTGTAACAATTGAAGAGATTGAAAAGGTTCTTCATAGGATTCCAATTCATCACAGAATAATACCTGCAATTAAAGCAGCTTATGCTTTAGGGTGTGATTTGAGGGTTGTGAGTGATGCTAATATGTTTTACATTGAAACTATTTTGAAGCATTTGGGAATTAGTGAATATTTTTCAGAGATTAACACTAATCCAGGTTATGTTAATGAAGAAGGAAGGGTTAGAATTTCACCTTACCATGACTTCAACAAATGTTCACATGGTTGCACTCTTTGCCCTCCAAACATGTGCAAGGGTTTAATCATTGATAGAATTCAAAATACAATTTCTGAAGTGGATAAGAAGAGGTTCATCTACCTTGGTGATGGTGCTGGTGATTATTGTCCTAGTTTGAGGCTTAGAGAAAGAGACTTTGTGATGCCAAGGAAGAATTTTCCAGTGTGGGATTTGATATGCAAAGATCCTTTACTTATTAAGGCTGAAATTAATGGTTGGAGTGATGGAGAAGAGTTGGAACAAGTTTTGTTGCACTTGATCAATAAAATTATGATGGAGGAACATGTTCAATTCATTTCAACTGATTGCAAGTTGCAAACTCTATCTATTCCTGTGCTTGAATCATTGCCTAAAGCTCTCTCAGTTAGGCCATAA 819 0.3602 MSNIVIVFDFDKTIIDCDSDNWLIDELGFTDLFNQLLPTMPWNSVMDKMMMEFHANGVTIEEIEKVLHRIPIHHRIIPAIKAAYALGCDLRVVSDANMFYIETILKHLGISEYFSEINTNPGYVNEEGRVRISPYHDFNKCSHGCTLCPPNMCKGLIIDRIQNTISEVDKKRFIYLGDGAGDYCPSLRLRERDFVMPRKNFPVWDLICKDPLLIKAEINGWSDGEELEQVLLHLINKIMMEEHVQFISTDCKLQTLSIPVLESLPKALSVRP* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2425 272 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Tpr5g2425 272 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 3 199 IPR006384 GO:0016791
Tpr5g2425 272 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Tpr5g2425 272 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
Tpr5g2425 272 Gene3D - 1 188 IPR023214 -
Tpr5g2425 272 SUPERFAMILY HAD-like 4 188 IPR036412 -
Tpr5g2425 272 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 270 IPR016965 GO:0016791
Tpr5g2425 272 PANTHER INORGANIC PYROPHOSPHATASE 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2425 Tpr-Chr5 45895064 45896870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2425 K13248 - gmx:100785878 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4853 7 56513758 56515988 Tpr5g2425 5 45895064 45896870 PCT