Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4840 ATGGCATCATTCTCTGCTGTCAAATTCCTGCTCTACTTCTTTATAATATGGCTCATCAACTTCCTACCTCTATGCCAAGGTAAAGAGAACAATGAATATAAGTACCCATTTATTAAAAAAGCAAGTTCATTCTCATCTCCACCATCAATTTCAACCACCAACACAAATGATGGTTATGACTACATAATAGTAGGTGGTGGTACAGCAGGGTGCCCTTTAGCTGCAACCCTTTCAAAAAACTTCAATGTTTTGTTACTTGAAAGAGGAGGAGTACCTTTCACAAACCCTAATGTGTCATTTCTTGACAACTTTCACATTGCTTTGGCTGATACTTCACCAACTTCAGCTTCACAATTCTTCATGTCAACTGATGGAGTTTACAATGCTAGAGCAAGGGTTTTGGGTGGTGGTAGCTCTATTAATGCTGGTTTCTACACTAGAGCTAGCTCAAGATTTATACAGAAGATGGGTTGGGATGCAAAGCTAGTAAATAAGTCATATCCTTGGGTTGAAAAGCAGATTGTTCATCGTCCAACATTTTCGCATTGGCAAAGAGCATTGAGGGATGGTCTTCTAGATGCTGGTGTGTCTCCTTTTAATGGATTCACATATGAACATAAGTATGGAACCAAACTTGGTGGAACCATTTTTGACAGATTTGGTCGCCGCCACACTGCTGCTGAATTGCTTGCTTCTGGAAATCCTAACAAACTTACTGTTTTGATCTATGCCACTGTCCAAAAGATTGTTTTTGATACAACAGGAAAAAGACCAAAAGCAATGGGGGTAATTTTCAAGGATGAAAATGGGAAACAACACAAGGCAATTCTAGGAAATGATAAGCAAAGTGAAGTAATTGTATCAAGTGGAGCAATTGGGACTCCTCAAATGCTATTGCTTAGTGGAATTGGCTCAAAAGCAGAACTTGAGAAGTTGAAAATTCCTGTGGTACTTGACAACAGATTTGTTGGAAAAGGCATGGCTGATAACCCAATGAACACAATTTTTGTTCCTCTTAAGAAACCAGTCAAGCAGTCATTGATAGAAACAGTTGGTATTACCAATAGGGGTGTGTATATTGAAGCTAGCAGTGGGTTTGGACAGTCCAGTGATAGCATTCACTGCCACCATGGTATGTTATCAGCTGAGATTGGACAGCTCTCCACAATTCCTCCAAAGCAAAGATCAGAAGAAGCTATTAAAGCTTTTATGAAGAACAAAAAAGACATTCCAATTGAAGCATTTAAGGGAGGCTTCATCTTAACAAAAGTTGCAAATCCATGGTCAACAGGTGATCTCAGATTGATCAACACCAATGTAGAAGACAACCCTGCTGTTACATTCAACTACTTCAGTCACCCTGCCGATCTTCAACGCTGCGTCGAGGGAATCCAGTTAGTAACAAAGGTTGTTCAGTCACAGCACTTCACAAACCTTACTATGTGTGTCAGAGAAACTACAGAACAACTTCTCAACAGCACTGTGAAGGCTAATGTTAACCTCATACCGAAGCATGTCAATGACACGAAATCACTAGAACAATTTTGTAAAGATACTGTGATTACTATTTGGCACTATCATGGTGGATGTCATGTAGGGAAGGTCGTCGACTCGGATCATAAGGTTCTTGGCGTTAACAGACTTCGTGTCATAGATGGATCGACATTTACCGAGTCACCAGGAACTAATCCTCAAGCTACTGTCATGATGATGGGCAGGTACATGGGACTGAAGATTTTAAGAGATAGGTTGGGGAAATTTGCTGGTGTTTGA 1773 0.4021 MASFSAVKFLLYFFIIWLINFLPLCQGKENNEYKYPFIKKASSFSSPPSISTTNTNDGYDYIIVGGGTAGCPLAATLSKNFNVLLLERGGVPFTNPNVSFLDNFHIALADTSPTSASQFFMSTDGVYNARARVLGGGSSINAGFYTRASSRFIQKMGWDAKLVNKSYPWVEKQIVHRPTFSHWQRALRDGLLDAGVSPFNGFTYEHKYGTKLGGTIFDRFGRRHTAAELLASGNPNKLTVLIYATVQKIVFDTTGKRPKAMGVIFKDENGKQHKAILGNDKQSEVIVSSGAIGTPQMLLLSGIGSKAELEKLKIPVVLDNRFVGKGMADNPMNTIFVPLKKPVKQSLIETVGITNRGVYIEASSGFGQSSDSIHCHHGMLSAEIGQLSTIPPKQRSEEAIKAFMKNKKDIPIEAFKGGFILTKVANPWSTGDLRLINTNVEDNPAVTFNYFSHPADLQRCVEGIQLVTKVVQSQHFTNLTMCVRETTEQLLNSTVKANVNLIPKHVNDTKSLEQFCKDTVITIWHYHGGCHVGKVVDSDHKVLGVNRLRVIDGSTFTESPGTNPQATVMMMGRYMGLKILRDRLGKFAGV* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4840 590 Pfam GMC oxidoreductase 59 331 IPR000172 GO:0016614|GO:0050660
Tpr7g4840 590 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 529 - -
Tpr7g4840 590 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 590 - -
Tpr7g4840 590 PIRSF Alcohol_oxidase 37 588 IPR012132 GO:0050660
Tpr7g4840 590 ProSitePatterns GMC oxidoreductases signature 2. 290 304 IPR000172 GO:0016614|GO:0050660
Tpr7g4840 590 SUPERFAMILY FAD/NAD(P)-binding domain 52 582 IPR036188 -
Tpr7g4840 590 Gene3D - 59 572 IPR036188 -
Tpr7g4840 590 Gene3D - 176 522 - -
Tpr7g4840 590 Pfam GMC oxidoreductase 427 573 IPR007867 GO:0016614
Tpr7g4840 590 PANTHER OSJNBA0019K04.7 PROTEIN 2 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4840 Tpr-Chr7 56362788 56368881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4840 13 585 Miscellaneous Gene Families AT3G56060 49.393 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4840 K15403 - gmx:100818122 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4840 7 56362788 56368881 Tpr5g2384 5 45462263 45469861 PCT