Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2384 ATGGCTTCAGTTGGTACAGTCAAATTTTTATTGTGCTTTGTTCTATGGCTCTGGAACTGCAACTTTCTACCTCCTTGTCAAGGTAAACAAGAAGTGTATCCATTTATAAAAAAAGCAAGTTCATTTTCATCACCATCAATATCAACTACATCACTCAACAAAGCTTATGATTACATAATTGTTGGAGGTGGAACTGCAGGGTGTCCATTAGCAGCAACATTATCTCAAAATTTCAGTGTTTTATTACTTGAAAGAGGAGGTGTTCCTTTCACTAATCCAAATGTAACATTTCTTGAAAATTTTCACATTACCTTGGCAGACACTTCATCAACTTCAGCTTCTCAATATTTTCTTTCAACTGATGGAGTTTTTAATGCAAGGGGAAGAGTTTTGGGTGGTGGTAGTGCTATCAATGCTGGTTTCTATACTAGAGCAAGTTCAAGGTTTATAAACAAGGTAGGATGGGATACAAAGCTAGTAAATGAGTCATACCCTTGGGTTGAGAAGCAAATTGTTCATCGTCCGAAGTTTTCGCCATTTCAGAGAGCATTGAGGGATAGCCTTATAGACACTGGTGTCTCTCCTTATAATGGCTTTACCTATGATCATATTTATGGAACAAAGGTTGGTGGAACAATTTTCGACAGATTTGGTCGCCGTCACACAACTGCAGAACTTCTTGCTTCTGGAAACCCTGACAAACTTACAGTTTTGGTCCACGCCACTGTCCAAAAGATCGTTTTCGATACAACAGGTAAAAGACCAAAAGCTATAGGAGTTATTTTCAATGATGAAAATGGGAAACAACATGAAGCAATGCTTGGAAATGATATGCAAAGTGAAGTGATATTGTCTAGTGGAGCAATTGGAAGTCCTCAAATGCTATTGCTAAGTGGAATTGGTCCTAAAGATGAACTTCAAAATTTGAACATATCAGTGGTCCTTAACAATCCATTTGTTGGGAAGGGAATGATTGATAATCCTATGAACAATATTTTTGTTCCTTCTAATAGGCCAGTTCATCAGTCACTCATACAAACTGTTGGTATCACCAAGAAAGGTGTGTACATTGAGGCTAGCAGTGGGTTTAGTCAGTCCAATAGCAGCATTCATTGCCATCATGGTATCGTGTCAGCTGAGATTGGTCAACTTTCTACAATTCCTCCTAAGCAAAGATCAATAGAAGCAATTCAAGCTTACGTAAAGAGCAAGCGAGATATACCGGTCGAAGCATTTAACGGAGGCTTTGTATTAACAAAAGTAGGCAGTGCTTGGTCAGTAGGTGAGCTCAAGTTGAATAACACCAATGTGGATGACAATCCTACTATTACCTTCAACTACTTCAGTCATCCATACGATCTGAAGCGCTGCGTCGAAGGGGTCCGCATGGCAGTTAAAGTAGTTCAATCGGAACACTTCACAAACTATACATTGTGTAAGAAAGAAAGCATAGAGAAAATTCTTAACATTAGTGTGAAAGCTAATGTCAACTTCATACCAAGACATGCCAATGACACAACTTCACTAGAGCAGTTTTGCAAAGACACTGTTATCACAATTTGGCACTATCATGGTGGATGTCATGTGGGGAAGGTAGTTGATCCTGATTACAAGGTTCTTGATGTTGAAAGACTTCGAGTCGTCGATGGCTCGACATTTACTGAATCACCAGGAACAAATCCTCAAGCCACTGTAATGATGATGGGAAGGTACATGGGAGTGAAGATTTTGAGAGATAGGTTGGGGAGATTGGCTGGTATATAA 1764 0.3923 MASVGTVKFLLCFVLWLWNCNFLPPCQGKQEVYPFIKKASSFSSPSISTTSLNKAYDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPFTNPNVTFLENFHITLADTSSTSASQYFLSTDGVFNARGRVLGGGSAINAGFYTRASSRFINKVGWDTKLVNESYPWVEKQIVHRPKFSPFQRALRDSLIDTGVSPYNGFTYDHIYGTKVGGTIFDRFGRRHTTAELLASGNPDKLTVLVHATVQKIVFDTTGKRPKAIGVIFNDENGKQHEAMLGNDMQSEVILSSGAIGSPQMLLLSGIGPKDELQNLNISVVLNNPFVGKGMIDNPMNNIFVPSNRPVHQSLIQTVGITKKGVYIEASSGFSQSNSSIHCHHGIVSAEIGQLSTIPPKQRSIEAIQAYVKSKRDIPVEAFNGGFVLTKVGSAWSVGELKLNNTNVDDNPTITFNYFSHPYDLKRCVEGVRMAVKVVQSEHFTNYTLCKKESIEKILNISVKANVNFIPRHANDTTSLEQFCKDTVITIWHYHGGCHVGKVVDPDYKVLDVERLRVVDGSTFTESPGTNPQATVMMMGRYMGVKILRDRLGRLAGI* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2384 587 ProSitePatterns GMC oxidoreductases signature 2. 287 301 IPR000172 GO:0016614|GO:0050660
Tpr5g2384 587 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 587 - -
Tpr5g2384 587 PANTHER OSJNBA0019K04.7 PROTEIN 2 587 - -
Tpr5g2384 587 SUPERFAMILY FAD/NAD(P)-binding domain 51 580 IPR036188 -
Tpr5g2384 587 Gene3D - 56 569 IPR036188 -
Tpr5g2384 587 Pfam GMC oxidoreductase 426 570 IPR007867 GO:0016614
Tpr5g2384 587 Gene3D - 173 519 - -
Tpr5g2384 587 SUPERFAMILY FAD-linked reductases, C-terminal domain 324 526 - -
Tpr5g2384 587 PIRSF Alcohol_oxidase 36 585 IPR012132 GO:0050660
Tpr5g2384 587 Pfam GMC oxidoreductase 56 328 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2384 Tpr-Chr5 45462263 45469861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2384 14 580 Miscellaneous Gene Families AT5G51950 49.050 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2384 K15403 - gmx:100788704 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4840 7 56362788 56368881 Tpr5g2384 5 45462263 45469861 PCT